Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9672 | 29239;29240;29241 | chr2:178707553;178707552;178707551 | chr2:179572280;179572279;179572278 |
N2AB | 9355 | 28288;28289;28290 | chr2:178707553;178707552;178707551 | chr2:179572280;179572279;179572278 |
N2A | 8428 | 25507;25508;25509 | chr2:178707553;178707552;178707551 | chr2:179572280;179572279;179572278 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs769996978 | 0.007 | 0.003 | None | 0.331 | 0.198 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.34E-05 | 0 |
T/I | rs769996978 | 0.007 | 0.003 | None | 0.331 | 0.198 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/I | rs769996978 | 0.007 | 0.003 | None | 0.331 | 0.198 | None | gnomAD-4.0.0 | 6.07434E-05 | None | None | None | None | N | None | 4.00481E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.37563E-05 | 0 | 1.28115E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1033 | likely_benign | 0.1039 | benign | -0.913 | Destabilizing | None | N | 0.2 | neutral | None | None | None | None | N |
T/C | 0.615 | likely_pathogenic | 0.5942 | pathogenic | -0.434 | Destabilizing | 0.883 | D | 0.559 | neutral | None | None | None | None | N |
T/D | 0.6599 | likely_pathogenic | 0.554 | ambiguous | -0.089 | Destabilizing | 0.22 | N | 0.545 | neutral | None | None | None | None | N |
T/E | 0.5788 | likely_pathogenic | 0.4385 | ambiguous | -0.081 | Destabilizing | 0.124 | N | 0.517 | neutral | None | None | None | None | N |
T/F | 0.2722 | likely_benign | 0.2577 | benign | -0.94 | Destabilizing | 0.001 | N | 0.446 | neutral | None | None | None | None | N |
T/G | 0.3867 | ambiguous | 0.3716 | ambiguous | -1.179 | Destabilizing | 0.055 | N | 0.545 | neutral | None | None | None | None | N |
T/H | 0.4111 | ambiguous | 0.3551 | ambiguous | -1.349 | Destabilizing | 0.667 | D | 0.586 | neutral | None | None | None | None | N |
T/I | 0.2347 | likely_benign | 0.2041 | benign | -0.291 | Destabilizing | 0.003 | N | 0.331 | neutral | None | None | None | None | N |
T/K | 0.494 | ambiguous | 0.3418 | ambiguous | -0.73 | Destabilizing | 0.124 | N | 0.531 | neutral | None | None | None | None | N |
T/L | 0.1563 | likely_benign | 0.1478 | benign | -0.291 | Destabilizing | 0.055 | N | 0.463 | neutral | None | None | None | None | N |
T/M | 0.1097 | likely_benign | 0.1034 | benign | -0.048 | Destabilizing | 0.667 | D | 0.561 | neutral | None | None | None | None | N |
T/N | 0.188 | likely_benign | 0.1868 | benign | -0.642 | Destabilizing | 0.096 | N | 0.525 | neutral | None | None | None | None | N |
T/P | 0.5495 | ambiguous | 0.4594 | ambiguous | -0.466 | Destabilizing | 0.602 | D | 0.585 | neutral | None | None | None | None | N |
T/Q | 0.3927 | ambiguous | 0.3178 | benign | -0.761 | Destabilizing | 0.497 | N | 0.579 | neutral | None | None | None | None | N |
T/R | 0.4116 | ambiguous | 0.2654 | benign | -0.49 | Destabilizing | 0.497 | N | 0.587 | neutral | None | None | None | None | N |
T/S | 0.1183 | likely_benign | 0.1227 | benign | -0.947 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
T/V | 0.167 | likely_benign | 0.1653 | benign | -0.466 | Destabilizing | 0.055 | N | 0.484 | neutral | None | None | None | None | N |
T/W | 0.7587 | likely_pathogenic | 0.713 | pathogenic | -0.877 | Destabilizing | 0.958 | D | 0.597 | neutral | None | None | None | None | N |
T/Y | 0.3754 | ambiguous | 0.3541 | ambiguous | -0.66 | Destabilizing | 0.331 | N | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.