Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9674 | 29245;29246;29247 | chr2:178707547;178707546;178707545 | chr2:179572274;179572273;179572272 |
N2AB | 9357 | 28294;28295;28296 | chr2:178707547;178707546;178707545 | chr2:179572274;179572273;179572272 |
N2A | 8430 | 25513;25514;25515 | chr2:178707547;178707546;178707545 | chr2:179572274;179572273;179572272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.968 | None | 0.631 | 0.248 | 0.292423486923 | gnomAD-4.0.0 | 6.84432E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09765E-06 | 0 | 1.65678E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5235 | ambiguous | 0.3807 | ambiguous | -0.187 | Destabilizing | 0.702 | D | 0.614 | neutral | None | None | None | None | N |
K/C | 0.8539 | likely_pathogenic | 0.7946 | pathogenic | -0.25 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
K/D | 0.8649 | likely_pathogenic | 0.7669 | pathogenic | 0.197 | Stabilizing | 0.976 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/E | 0.461 | ambiguous | 0.3036 | benign | 0.215 | Stabilizing | 0.896 | D | 0.609 | neutral | None | None | None | None | N |
K/F | 0.8804 | likely_pathogenic | 0.7979 | pathogenic | -0.331 | Destabilizing | 0.988 | D | 0.757 | deleterious | None | None | None | None | N |
K/G | 0.6768 | likely_pathogenic | 0.5283 | ambiguous | -0.423 | Destabilizing | 0.919 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/H | 0.4515 | ambiguous | 0.3915 | ambiguous | -0.796 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/I | 0.5596 | ambiguous | 0.4164 | ambiguous | 0.365 | Stabilizing | 0.968 | D | 0.752 | deleterious | None | None | None | None | N |
K/L | 0.5831 | likely_pathogenic | 0.4398 | ambiguous | 0.365 | Stabilizing | 0.851 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/M | 0.4497 | ambiguous | 0.3276 | benign | 0.321 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/N | 0.6765 | likely_pathogenic | 0.5332 | ambiguous | 0.182 | Stabilizing | 0.896 | D | 0.599 | neutral | None | None | None | None | N |
K/P | 0.8786 | likely_pathogenic | 0.7669 | pathogenic | 0.21 | Stabilizing | 0.988 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/Q | 0.2309 | likely_benign | 0.1811 | benign | -0.045 | Destabilizing | 0.968 | D | 0.631 | neutral | None | None | None | None | N |
K/R | 0.088 | likely_benign | 0.0829 | benign | -0.112 | Destabilizing | 0.059 | N | 0.423 | neutral | None | None | None | None | N |
K/S | 0.5779 | likely_pathogenic | 0.4372 | ambiguous | -0.426 | Destabilizing | 0.307 | N | 0.423 | neutral | None | None | None | None | N |
K/T | 0.2837 | likely_benign | 0.1894 | benign | -0.245 | Destabilizing | 0.103 | N | 0.442 | neutral | None | None | None | None | N |
K/V | 0.4703 | ambiguous | 0.3637 | ambiguous | 0.21 | Stabilizing | 0.952 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/W | 0.8743 | likely_pathogenic | 0.7925 | pathogenic | -0.251 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
K/Y | 0.7874 | likely_pathogenic | 0.6948 | pathogenic | 0.092 | Stabilizing | 0.996 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.