Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9675 | 29248;29249;29250 | chr2:178707544;178707543;178707542 | chr2:179572271;179572270;179572269 |
N2AB | 9358 | 28297;28298;28299 | chr2:178707544;178707543;178707542 | chr2:179572271;179572270;179572269 |
N2A | 8431 | 25516;25517;25518 | chr2:178707544;178707543;178707542 | chr2:179572271;179572270;179572269 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | None | None | 0.115 | 0.096 | 0.0611884634855 | gnomAD-4.0.0 | 1.59258E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86107E-06 | 0 | 0 |
S/L | None | None | 0.027 | None | 0.65 | 0.238 | 0.437100570223 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0626 | likely_benign | 0.0576 | benign | -0.814 | Destabilizing | None | N | 0.115 | neutral | None | None | None | None | N |
S/C | 0.0622 | likely_benign | 0.0741 | benign | -0.565 | Destabilizing | 0.001 | N | 0.455 | neutral | None | None | None | None | N |
S/D | 0.8879 | likely_pathogenic | 0.8771 | pathogenic | -0.767 | Destabilizing | 0.149 | N | 0.641 | neutral | None | None | None | None | N |
S/E | 0.9185 | likely_pathogenic | 0.9086 | pathogenic | -0.659 | Destabilizing | 0.149 | N | 0.601 | neutral | None | None | None | None | N |
S/F | 0.5921 | likely_pathogenic | 0.512 | ambiguous | -0.717 | Destabilizing | 0.555 | D | 0.752 | deleterious | None | None | None | None | N |
S/G | 0.0948 | likely_benign | 0.1 | benign | -1.166 | Destabilizing | 0.035 | N | 0.543 | neutral | None | None | None | None | N |
S/H | 0.8246 | likely_pathogenic | 0.7902 | pathogenic | -1.568 | Destabilizing | 0.935 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/I | 0.4473 | ambiguous | 0.367 | ambiguous | 0.047 | Stabilizing | 0.081 | N | 0.684 | prob.neutral | None | None | None | None | N |
S/K | 0.9734 | likely_pathogenic | 0.9641 | pathogenic | -0.503 | Destabilizing | 0.149 | N | 0.597 | neutral | None | None | None | None | N |
S/L | 0.2879 | likely_benign | 0.2154 | benign | 0.047 | Stabilizing | 0.027 | N | 0.65 | neutral | None | None | None | None | N |
S/M | 0.4495 | ambiguous | 0.3765 | ambiguous | 0.139 | Stabilizing | 0.555 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/N | 0.5078 | ambiguous | 0.4769 | ambiguous | -0.833 | Destabilizing | 0.262 | N | 0.633 | neutral | None | None | None | None | N |
S/P | 0.931 | likely_pathogenic | 0.9063 | pathogenic | -0.204 | Destabilizing | 0.317 | N | 0.752 | deleterious | None | None | None | None | N |
S/Q | 0.8795 | likely_pathogenic | 0.8599 | pathogenic | -0.775 | Destabilizing | 0.555 | D | 0.666 | neutral | None | None | None | None | N |
S/R | 0.9465 | likely_pathogenic | 0.9278 | pathogenic | -0.674 | Destabilizing | 0.38 | N | 0.753 | deleterious | None | None | None | None | N |
S/T | 0.1575 | likely_benign | 0.1362 | benign | -0.681 | Destabilizing | 0.027 | N | 0.535 | neutral | None | None | None | None | N |
S/V | 0.3187 | likely_benign | 0.2735 | benign | -0.204 | Destabilizing | 0.002 | N | 0.46 | neutral | None | None | None | None | N |
S/W | 0.7805 | likely_pathogenic | 0.7078 | pathogenic | -0.811 | Destabilizing | 0.935 | D | 0.747 | deleterious | None | None | None | None | N |
S/Y | 0.5623 | ambiguous | 0.4869 | ambiguous | -0.458 | Destabilizing | 0.555 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.