Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9678 | 29257;29258;29259 | chr2:178707535;178707534;178707533 | chr2:179572262;179572261;179572260 |
N2AB | 9361 | 28306;28307;28308 | chr2:178707535;178707534;178707533 | chr2:179572262;179572261;179572260 |
N2A | 8434 | 25525;25526;25527 | chr2:178707535;178707534;178707533 | chr2:179572262;179572261;179572260 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.001 | None | 0.204 | 0.12 | 0.163833314356 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1 | likely_benign | 0.1034 | benign | -0.823 | Destabilizing | 0.001 | N | 0.204 | neutral | None | None | None | None | N |
T/C | 0.5536 | ambiguous | 0.6054 | pathogenic | -0.541 | Destabilizing | 0.947 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/D | 0.4296 | ambiguous | 0.4565 | ambiguous | -0.089 | Destabilizing | 0.7 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/E | 0.3768 | ambiguous | 0.3637 | ambiguous | -0.084 | Destabilizing | 0.7 | D | 0.661 | neutral | None | None | None | None | N |
T/F | 0.2135 | likely_benign | 0.2305 | benign | -0.873 | Destabilizing | 0.826 | D | 0.765 | deleterious | None | None | None | None | N |
T/G | 0.3425 | ambiguous | 0.3845 | ambiguous | -1.083 | Destabilizing | 0.25 | N | 0.651 | neutral | None | None | None | None | N |
T/H | 0.284 | likely_benign | 0.2977 | benign | -1.347 | Destabilizing | 0.982 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/I | 0.1475 | likely_benign | 0.1444 | benign | -0.225 | Destabilizing | 0.638 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/K | 0.305 | likely_benign | 0.2808 | benign | -0.664 | Destabilizing | 0.7 | D | 0.658 | neutral | None | None | None | None | N |
T/L | 0.114 | likely_benign | 0.1196 | benign | -0.225 | Destabilizing | 0.25 | N | 0.58 | neutral | None | None | None | None | N |
T/M | 0.1047 | likely_benign | 0.1021 | benign | 0.029 | Stabilizing | 0.947 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/N | 0.1335 | likely_benign | 0.1488 | benign | -0.603 | Destabilizing | 0.781 | D | 0.643 | neutral | None | None | None | None | N |
T/P | 0.4702 | ambiguous | 0.5097 | ambiguous | -0.392 | Destabilizing | 0.638 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/Q | 0.2752 | likely_benign | 0.2717 | benign | -0.774 | Destabilizing | 0.826 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/R | 0.2352 | likely_benign | 0.213 | benign | -0.457 | Destabilizing | 0.7 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/S | 0.1209 | likely_benign | 0.1352 | benign | -0.926 | Destabilizing | 0.201 | N | 0.507 | neutral | None | None | None | None | N |
T/V | 0.1297 | likely_benign | 0.1357 | benign | -0.392 | Destabilizing | 0.25 | N | 0.506 | neutral | None | None | None | None | N |
T/W | 0.6276 | likely_pathogenic | 0.6577 | pathogenic | -0.781 | Destabilizing | 0.982 | D | 0.759 | deleterious | None | None | None | None | N |
T/Y | 0.3113 | likely_benign | 0.33 | benign | -0.55 | Destabilizing | 0.826 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.