Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9679 | 29260;29261;29262 | chr2:178707532;178707531;178707530 | chr2:179572259;179572258;179572257 |
N2AB | 9362 | 28309;28310;28311 | chr2:178707532;178707531;178707530 | chr2:179572259;179572258;179572257 |
N2A | 8435 | 25528;25529;25530 | chr2:178707532;178707531;178707530 | chr2:179572259;179572258;179572257 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs749610242 | -1.232 | 0.051 | None | 0.519 | 0.539 | 0.655038028955 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
I/T | rs749610242 | -1.232 | 0.051 | None | 0.519 | 0.539 | 0.655038028955 | gnomAD-4.0.0 | 4.79419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.3023E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7543 | likely_pathogenic | 0.7014 | pathogenic | -2.015 | Highly Destabilizing | 0.525 | D | 0.567 | neutral | None | None | None | None | N |
I/C | 0.8971 | likely_pathogenic | 0.8892 | pathogenic | -1.662 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | N |
I/D | 0.9912 | likely_pathogenic | 0.9862 | pathogenic | -2.237 | Highly Destabilizing | 0.974 | D | 0.662 | neutral | None | None | None | None | N |
I/E | 0.9788 | likely_pathogenic | 0.9664 | pathogenic | -2.198 | Highly Destabilizing | 0.974 | D | 0.663 | neutral | None | None | None | None | N |
I/F | 0.4432 | ambiguous | 0.4324 | ambiguous | -1.512 | Destabilizing | 0.966 | D | 0.473 | neutral | None | None | None | None | N |
I/G | 0.9461 | likely_pathogenic | 0.93 | pathogenic | -2.362 | Highly Destabilizing | 0.915 | D | 0.667 | neutral | None | None | None | None | N |
I/H | 0.9672 | likely_pathogenic | 0.9544 | pathogenic | -1.568 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/K | 0.9555 | likely_pathogenic | 0.9269 | pathogenic | -1.381 | Destabilizing | 0.974 | D | 0.661 | neutral | None | None | None | None | N |
I/L | 0.2504 | likely_benign | 0.2306 | benign | -1.098 | Destabilizing | 0.267 | N | 0.463 | neutral | None | None | None | None | N |
I/M | 0.2773 | likely_benign | 0.2482 | benign | -1.044 | Destabilizing | 0.966 | D | 0.531 | neutral | None | None | None | None | N |
I/N | 0.9022 | likely_pathogenic | 0.8616 | pathogenic | -1.38 | Destabilizing | 0.966 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/P | 0.9465 | likely_pathogenic | 0.9403 | pathogenic | -1.377 | Destabilizing | 0.991 | D | 0.68 | prob.neutral | None | None | None | None | N |
I/Q | 0.9574 | likely_pathogenic | 0.935 | pathogenic | -1.589 | Destabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/R | 0.9249 | likely_pathogenic | 0.8826 | pathogenic | -0.817 | Destabilizing | 0.974 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/S | 0.8384 | likely_pathogenic | 0.7847 | pathogenic | -1.981 | Destabilizing | 0.669 | D | 0.587 | neutral | None | None | None | None | N |
I/T | 0.7602 | likely_pathogenic | 0.7045 | pathogenic | -1.828 | Destabilizing | 0.051 | N | 0.519 | neutral | None | None | None | None | N |
I/V | 0.0692 | likely_benign | 0.0733 | benign | -1.377 | Destabilizing | 0.005 | N | 0.337 | neutral | None | None | None | None | N |
I/W | 0.9714 | likely_pathogenic | 0.9651 | pathogenic | -1.621 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/Y | 0.9003 | likely_pathogenic | 0.8823 | pathogenic | -1.367 | Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.