Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9701 | 29326;29327;29328 | chr2:178706895;178706894;178706893 | chr2:179571622;179571621;179571620 |
N2AB | 9384 | 28375;28376;28377 | chr2:178706895;178706894;178706893 | chr2:179571622;179571621;179571620 |
N2A | 8457 | 25594;25595;25596 | chr2:178706895;178706894;178706893 | chr2:179571622;179571621;179571620 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.901 | None | 0.464 | 0.202 | 0.466655310336 | gnomAD-4.0.0 | 1.36981E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5013 | ambiguous | 0.3004 | benign | -1.0 | Destabilizing | 0.008 | N | 0.137 | neutral | None | None | None | None | I |
V/C | 0.8985 | likely_pathogenic | 0.8313 | pathogenic | -0.677 | Destabilizing | 0.989 | D | 0.518 | neutral | None | None | None | None | I |
V/D | 0.8328 | likely_pathogenic | 0.5971 | pathogenic | -0.103 | Destabilizing | 0.961 | D | 0.619 | neutral | None | None | None | None | I |
V/E | 0.6478 | likely_pathogenic | 0.4769 | ambiguous | -0.102 | Destabilizing | 0.901 | D | 0.549 | neutral | None | None | None | None | I |
V/F | 0.4134 | ambiguous | 0.2432 | benign | -0.678 | Destabilizing | 0.923 | D | 0.515 | neutral | None | None | None | None | I |
V/G | 0.7222 | likely_pathogenic | 0.4572 | ambiguous | -1.29 | Destabilizing | 0.565 | D | 0.508 | neutral | None | None | None | None | I |
V/H | 0.8479 | likely_pathogenic | 0.6888 | pathogenic | -0.638 | Destabilizing | 0.996 | D | 0.63 | neutral | None | None | None | None | I |
V/I | 0.0857 | likely_benign | 0.0768 | benign | -0.324 | Destabilizing | 0.005 | N | 0.13 | neutral | None | None | None | None | I |
V/K | 0.6435 | likely_pathogenic | 0.5062 | ambiguous | -0.615 | Destabilizing | 0.923 | D | 0.558 | neutral | None | None | None | None | I |
V/L | 0.3274 | likely_benign | 0.2221 | benign | -0.324 | Destabilizing | 0.156 | N | 0.36 | neutral | None | None | None | None | I |
V/M | 0.3561 | ambiguous | 0.2491 | benign | -0.348 | Destabilizing | 0.901 | D | 0.464 | neutral | None | None | None | None | I |
V/N | 0.7257 | likely_pathogenic | 0.4815 | ambiguous | -0.464 | Destabilizing | 0.961 | D | 0.607 | neutral | None | None | None | None | I |
V/P | 0.9521 | likely_pathogenic | 0.851 | pathogenic | -0.513 | Destabilizing | 0.961 | D | 0.605 | neutral | None | None | None | None | I |
V/Q | 0.6167 | likely_pathogenic | 0.4526 | ambiguous | -0.566 | Destabilizing | 0.961 | D | 0.593 | neutral | None | None | None | None | I |
V/R | 0.5915 | likely_pathogenic | 0.4165 | ambiguous | -0.199 | Destabilizing | 0.923 | D | 0.606 | neutral | None | None | None | None | I |
V/S | 0.6016 | likely_pathogenic | 0.3609 | ambiguous | -1.077 | Destabilizing | 0.633 | D | 0.502 | neutral | None | None | None | None | I |
V/T | 0.4875 | ambiguous | 0.3218 | benign | -0.954 | Destabilizing | 0.775 | D | 0.385 | neutral | None | None | None | None | I |
V/W | 0.9505 | likely_pathogenic | 0.8796 | pathogenic | -0.821 | Destabilizing | 0.996 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/Y | 0.8216 | likely_pathogenic | 0.6599 | pathogenic | -0.506 | Destabilizing | 0.961 | D | 0.503 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.