Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9705 | 29338;29339;29340 | chr2:178706883;178706882;178706881 | chr2:179571610;179571609;179571608 |
N2AB | 9388 | 28387;28388;28389 | chr2:178706883;178706882;178706881 | chr2:179571610;179571609;179571608 |
N2A | 8461 | 25606;25607;25608 | chr2:178706883;178706882;178706881 | chr2:179571610;179571609;179571608 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.023 | None | 0.09 | 0.122 | 0.218112801441 | gnomAD-4.0.0 | 1.36967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3139 | likely_benign | 0.2516 | benign | -0.151 | Destabilizing | 0.329 | N | 0.296 | neutral | None | None | None | None | N |
Q/C | 0.8749 | likely_pathogenic | 0.7897 | pathogenic | -0.035 | Destabilizing | 0.995 | D | 0.368 | neutral | None | None | None | None | N |
Q/D | 0.6377 | likely_pathogenic | 0.4868 | ambiguous | 0.071 | Stabilizing | 0.704 | D | 0.294 | neutral | None | None | None | None | N |
Q/E | 0.1077 | likely_benign | 0.0942 | benign | 0.063 | Stabilizing | 0.425 | N | 0.279 | neutral | None | None | None | None | N |
Q/F | 0.9059 | likely_pathogenic | 0.8218 | pathogenic | -0.386 | Destabilizing | 0.981 | D | 0.392 | neutral | None | None | None | None | N |
Q/G | 0.4486 | ambiguous | 0.3169 | benign | -0.331 | Destabilizing | 0.329 | N | 0.319 | neutral | None | None | None | None | N |
Q/H | 0.4114 | ambiguous | 0.2961 | benign | -0.043 | Destabilizing | 0.975 | D | 0.372 | neutral | None | None | None | None | N |
Q/I | 0.607 | likely_pathogenic | 0.5237 | ambiguous | 0.238 | Stabilizing | 0.944 | D | 0.399 | neutral | None | None | None | None | N |
Q/K | 0.0819 | likely_benign | 0.0778 | benign | 0.066 | Stabilizing | 0.003 | N | 0.097 | neutral | None | None | None | None | N |
Q/L | 0.2924 | likely_benign | 0.2126 | benign | 0.238 | Stabilizing | 0.642 | D | 0.367 | neutral | None | None | None | None | N |
Q/M | 0.5842 | likely_pathogenic | 0.5004 | ambiguous | 0.142 | Stabilizing | 0.981 | D | 0.37 | neutral | None | None | None | None | N |
Q/N | 0.4754 | ambiguous | 0.3753 | ambiguous | -0.312 | Destabilizing | 0.704 | D | 0.287 | neutral | None | None | None | None | N |
Q/P | 0.4463 | ambiguous | 0.2144 | benign | 0.136 | Stabilizing | 0.784 | D | 0.384 | neutral | None | None | None | None | N |
Q/R | 0.1264 | likely_benign | 0.1011 | benign | 0.25 | Stabilizing | 0.023 | N | 0.09 | neutral | None | None | None | None | N |
Q/S | 0.3932 | ambiguous | 0.2999 | benign | -0.302 | Destabilizing | 0.013 | N | 0.098 | neutral | None | None | None | None | N |
Q/T | 0.3231 | likely_benign | 0.2666 | benign | -0.156 | Destabilizing | 0.329 | N | 0.327 | neutral | None | None | None | None | N |
Q/V | 0.4014 | ambiguous | 0.3366 | benign | 0.136 | Stabilizing | 0.704 | D | 0.363 | neutral | None | None | None | None | N |
Q/W | 0.8615 | likely_pathogenic | 0.6943 | pathogenic | -0.421 | Destabilizing | 0.995 | D | 0.379 | neutral | None | None | None | None | N |
Q/Y | 0.7792 | likely_pathogenic | 0.6407 | pathogenic | -0.131 | Destabilizing | 0.981 | D | 0.375 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.