Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9706 | 29341;29342;29343 | chr2:178706880;178706879;178706878 | chr2:179571607;179571606;179571605 |
N2AB | 9389 | 28390;28391;28392 | chr2:178706880;178706879;178706878 | chr2:179571607;179571606;179571605 |
N2A | 8462 | 25609;25610;25611 | chr2:178706880;178706879;178706878 | chr2:179571607;179571606;179571605 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.023 | None | 0.139 | 0.051 | 0.110078149338 | gnomAD-4.0.0 | 1.59501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2615 | likely_benign | 0.1937 | benign | -0.373 | Destabilizing | 0.013 | N | 0.08 | neutral | None | None | None | None | N |
S/C | 0.5061 | ambiguous | 0.321 | benign | -0.408 | Destabilizing | 0.993 | D | 0.347 | neutral | None | None | None | None | N |
S/D | 0.6243 | likely_pathogenic | 0.4303 | ambiguous | 0.28 | Stabilizing | 0.007 | N | 0.111 | neutral | None | None | None | None | N |
S/E | 0.8874 | likely_pathogenic | 0.7598 | pathogenic | 0.231 | Stabilizing | 0.329 | N | 0.212 | neutral | None | None | None | None | N |
S/F | 0.8955 | likely_pathogenic | 0.7185 | pathogenic | -0.87 | Destabilizing | 0.981 | D | 0.391 | neutral | None | None | None | None | N |
S/G | 0.2456 | likely_benign | 0.138 | benign | -0.531 | Destabilizing | 0.425 | N | 0.271 | neutral | None | None | None | None | N |
S/H | 0.8249 | likely_pathogenic | 0.6291 | pathogenic | -0.893 | Destabilizing | 0.944 | D | 0.35 | neutral | None | None | None | None | N |
S/I | 0.7762 | likely_pathogenic | 0.5054 | ambiguous | -0.083 | Destabilizing | 0.863 | D | 0.432 | neutral | None | None | None | None | N |
S/K | 0.9735 | likely_pathogenic | 0.8946 | pathogenic | -0.402 | Destabilizing | 0.704 | D | 0.197 | neutral | None | None | None | None | N |
S/L | 0.6406 | likely_pathogenic | 0.3853 | ambiguous | -0.083 | Destabilizing | 0.704 | D | 0.355 | neutral | None | None | None | None | N |
S/M | 0.7193 | likely_pathogenic | 0.5005 | ambiguous | -0.143 | Destabilizing | 0.981 | D | 0.347 | neutral | None | None | None | None | N |
S/N | 0.2228 | likely_benign | 0.1326 | benign | -0.283 | Destabilizing | 0.023 | N | 0.139 | neutral | None | None | None | None | N |
S/P | 0.383 | ambiguous | 0.277 | benign | -0.148 | Destabilizing | 0.007 | N | 0.143 | neutral | None | None | None | None | N |
S/Q | 0.9106 | likely_pathogenic | 0.7874 | pathogenic | -0.407 | Destabilizing | 0.944 | D | 0.325 | neutral | None | None | None | None | N |
S/R | 0.9658 | likely_pathogenic | 0.8644 | pathogenic | -0.244 | Destabilizing | 0.927 | D | 0.404 | neutral | None | None | None | None | N |
S/T | 0.2785 | likely_benign | 0.1778 | benign | -0.33 | Destabilizing | 0.023 | N | 0.115 | neutral | None | None | None | None | N |
S/V | 0.7674 | likely_pathogenic | 0.5418 | ambiguous | -0.148 | Destabilizing | 0.704 | D | 0.36 | neutral | None | None | None | None | N |
S/W | 0.916 | likely_pathogenic | 0.7911 | pathogenic | -0.921 | Destabilizing | 0.995 | D | 0.467 | neutral | None | None | None | None | N |
S/Y | 0.7917 | likely_pathogenic | 0.5755 | pathogenic | -0.602 | Destabilizing | 0.981 | D | 0.391 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.