Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9713 | 29362;29363;29364 | chr2:178706737;178706736;178706735 | chr2:179571464;179571463;179571462 |
N2AB | 9396 | 28411;28412;28413 | chr2:178706737;178706736;178706735 | chr2:179571464;179571463;179571462 |
N2A | 8469 | 25630;25631;25632 | chr2:178706737;178706736;178706735 | chr2:179571464;179571463;179571462 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs763317642 | None | 0.022 | None | 0.151 | 0.114 | 0.166414681773 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1821 | likely_benign | 0.1284 | benign | -0.807 | Destabilizing | 0.022 | N | 0.151 | neutral | None | None | None | None | N |
T/C | 0.8031 | likely_pathogenic | 0.7077 | pathogenic | -0.538 | Destabilizing | 0.998 | D | 0.36 | neutral | None | None | None | None | N |
T/D | 0.6988 | likely_pathogenic | 0.5163 | ambiguous | -0.404 | Destabilizing | 0.842 | D | 0.404 | neutral | None | None | None | None | N |
T/E | 0.5844 | likely_pathogenic | 0.4256 | ambiguous | -0.426 | Destabilizing | 0.842 | D | 0.39 | neutral | None | None | None | None | N |
T/F | 0.7871 | likely_pathogenic | 0.5951 | pathogenic | -1.055 | Destabilizing | 0.991 | D | 0.44 | neutral | None | None | None | None | N |
T/G | 0.3268 | likely_benign | 0.2749 | benign | -1.028 | Destabilizing | 0.007 | N | 0.176 | neutral | None | None | None | None | N |
T/H | 0.654 | likely_pathogenic | 0.5018 | ambiguous | -1.378 | Destabilizing | 0.998 | D | 0.424 | neutral | None | None | None | None | N |
T/I | 0.7957 | likely_pathogenic | 0.5917 | pathogenic | -0.318 | Destabilizing | 0.966 | D | 0.357 | neutral | None | None | None | None | N |
T/K | 0.5527 | ambiguous | 0.3772 | ambiguous | -0.692 | Destabilizing | 0.842 | D | 0.409 | neutral | None | None | None | None | N |
T/L | 0.4598 | ambiguous | 0.3008 | benign | -0.318 | Destabilizing | 0.842 | D | 0.397 | neutral | None | None | None | None | N |
T/M | 0.2029 | likely_benign | 0.1423 | benign | 0.094 | Stabilizing | 0.998 | D | 0.359 | neutral | None | None | None | None | N |
T/N | 0.2858 | likely_benign | 0.1787 | benign | -0.632 | Destabilizing | 0.801 | D | 0.411 | neutral | None | None | None | None | N |
T/P | 0.9398 | likely_pathogenic | 0.7715 | pathogenic | -0.451 | Destabilizing | 0.966 | D | 0.349 | neutral | None | None | None | None | N |
T/Q | 0.4519 | ambiguous | 0.3408 | ambiguous | -0.892 | Destabilizing | 0.974 | D | 0.361 | neutral | None | None | None | None | N |
T/R | 0.5367 | ambiguous | 0.3233 | benign | -0.402 | Destabilizing | 0.974 | D | 0.361 | neutral | None | None | None | None | N |
T/S | 0.1622 | likely_benign | 0.1322 | benign | -0.89 | Destabilizing | 0.136 | N | 0.186 | neutral | None | None | None | None | N |
T/V | 0.6037 | likely_pathogenic | 0.4325 | ambiguous | -0.451 | Destabilizing | 0.842 | D | 0.377 | neutral | None | None | None | None | N |
T/W | 0.9466 | likely_pathogenic | 0.8745 | pathogenic | -0.969 | Destabilizing | 0.998 | D | 0.485 | neutral | None | None | None | None | N |
T/Y | 0.7595 | likely_pathogenic | 0.57 | pathogenic | -0.722 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.