Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9714 | 29365;29366;29367 | chr2:178706734;178706733;178706732 | chr2:179571461;179571460;179571459 |
N2AB | 9397 | 28414;28415;28416 | chr2:178706734;178706733;178706732 | chr2:179571461;179571460;179571459 |
N2A | 8470 | 25633;25634;25635 | chr2:178706734;178706733;178706732 | chr2:179571461;179571460;179571459 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.103 | None | 0.173 | 0.1 | 0.132336055621 | gnomAD-4.0.0 | 1.60692E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.81371E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | None | None | 0.984 | None | 0.527 | 0.33 | 0.250579442822 | gnomAD-4.0.0 | 1.60692E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88319E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1433 | likely_benign | 0.099 | benign | -0.721 | Destabilizing | 0.103 | N | 0.173 | neutral | None | None | None | None | I |
T/C | 0.767 | likely_pathogenic | 0.616 | pathogenic | -0.448 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | I |
T/D | 0.7767 | likely_pathogenic | 0.6096 | pathogenic | -0.65 | Destabilizing | 0.988 | D | 0.501 | neutral | None | None | None | None | I |
T/E | 0.6287 | likely_pathogenic | 0.4575 | ambiguous | -0.679 | Destabilizing | 0.988 | D | 0.483 | neutral | None | None | None | None | I |
T/F | 0.6454 | likely_pathogenic | 0.3989 | ambiguous | -0.958 | Destabilizing | 0.988 | D | 0.631 | neutral | None | None | None | None | I |
T/G | 0.6366 | likely_pathogenic | 0.4376 | ambiguous | -0.939 | Destabilizing | 0.919 | D | 0.489 | neutral | None | None | None | None | I |
T/H | 0.6038 | likely_pathogenic | 0.426 | ambiguous | -1.282 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
T/I | 0.2825 | likely_benign | 0.1805 | benign | -0.237 | Destabilizing | 0.211 | N | 0.241 | neutral | None | None | None | None | I |
T/K | 0.416 | ambiguous | 0.2782 | benign | -0.738 | Destabilizing | 0.988 | D | 0.483 | neutral | None | None | None | None | I |
T/L | 0.259 | likely_benign | 0.1519 | benign | -0.237 | Destabilizing | 0.702 | D | 0.427 | neutral | None | None | None | None | I |
T/M | 0.1589 | likely_benign | 0.1095 | benign | 0.225 | Stabilizing | 0.988 | D | 0.557 | neutral | None | None | None | None | I |
T/N | 0.3671 | ambiguous | 0.2251 | benign | -0.665 | Destabilizing | 0.995 | D | 0.471 | neutral | None | None | None | None | I |
T/P | 0.3581 | ambiguous | 0.2138 | benign | -0.368 | Destabilizing | 0.984 | D | 0.527 | neutral | None | None | None | None | I |
T/Q | 0.4878 | ambiguous | 0.3431 | ambiguous | -0.96 | Destabilizing | 0.996 | D | 0.544 | neutral | None | None | None | None | I |
T/R | 0.373 | ambiguous | 0.2156 | benign | -0.386 | Destabilizing | 0.988 | D | 0.546 | neutral | None | None | None | None | I |
T/S | 0.2562 | likely_benign | 0.1681 | benign | -0.869 | Destabilizing | 0.811 | D | 0.382 | neutral | None | None | None | None | I |
T/V | 0.1784 | likely_benign | 0.1319 | benign | -0.368 | Destabilizing | 0.034 | N | 0.181 | neutral | None | None | None | None | I |
T/W | 0.8922 | likely_pathogenic | 0.7599 | pathogenic | -0.89 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
T/Y | 0.7201 | likely_pathogenic | 0.4941 | ambiguous | -0.644 | Destabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.