Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9720 | 29383;29384;29385 | chr2:178706716;178706715;178706714 | chr2:179571443;179571442;179571441 |
N2AB | 9403 | 28432;28433;28434 | chr2:178706716;178706715;178706714 | chr2:179571443;179571442;179571441 |
N2A | 8476 | 25651;25652;25653 | chr2:178706716;178706715;178706714 | chr2:179571443;179571442;179571441 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs780071353 | 0.335 | 0.41 | None | 0.467 | 0.305 | 0.294561560033 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/E | rs780071353 | 0.335 | 0.41 | None | 0.467 | 0.305 | 0.294561560033 | gnomAD-4.0.0 | 8.00869E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44115E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8555 | likely_pathogenic | 0.6806 | pathogenic | -0.712 | Destabilizing | 0.648 | D | 0.565 | neutral | None | None | None | None | I |
K/C | 0.9464 | likely_pathogenic | 0.9049 | pathogenic | -0.898 | Destabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | I |
K/D | 0.9718 | likely_pathogenic | 0.9102 | pathogenic | -0.457 | Destabilizing | 0.866 | D | 0.745 | deleterious | None | None | None | None | I |
K/E | 0.6436 | likely_pathogenic | 0.3708 | ambiguous | -0.362 | Destabilizing | 0.41 | N | 0.467 | neutral | None | None | None | None | I |
K/F | 0.9789 | likely_pathogenic | 0.9515 | pathogenic | -0.59 | Destabilizing | 0.98 | D | 0.755 | deleterious | None | None | None | None | I |
K/G | 0.9536 | likely_pathogenic | 0.8607 | pathogenic | -1.053 | Destabilizing | 0.866 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/H | 0.6559 | likely_pathogenic | 0.5218 | ambiguous | -1.416 | Destabilizing | 0.98 | D | 0.734 | prob.delet. | None | None | None | None | I |
K/I | 0.7774 | likely_pathogenic | 0.6579 | pathogenic | 0.162 | Stabilizing | 0.908 | D | 0.769 | deleterious | None | None | None | None | I |
K/L | 0.8225 | likely_pathogenic | 0.6865 | pathogenic | 0.162 | Stabilizing | 0.866 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/M | 0.6544 | likely_pathogenic | 0.4877 | ambiguous | 0.162 | Stabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/N | 0.8866 | likely_pathogenic | 0.7573 | pathogenic | -0.653 | Destabilizing | 0.83 | D | 0.657 | neutral | None | None | None | None | I |
K/P | 0.9975 | likely_pathogenic | 0.9875 | pathogenic | -0.1 | Destabilizing | 0.929 | D | 0.744 | deleterious | None | None | None | None | I |
K/Q | 0.3817 | ambiguous | 0.2504 | benign | -0.833 | Destabilizing | 0.83 | D | 0.644 | neutral | None | None | None | None | I |
K/R | 0.1091 | likely_benign | 0.0941 | benign | -0.641 | Destabilizing | 0.01 | N | 0.351 | neutral | None | None | None | None | I |
K/S | 0.8844 | likely_pathogenic | 0.743 | pathogenic | -1.338 | Destabilizing | 0.648 | D | 0.533 | neutral | None | None | None | None | I |
K/T | 0.5559 | ambiguous | 0.3615 | ambiguous | -1.044 | Destabilizing | 0.83 | D | 0.707 | prob.neutral | None | None | None | None | I |
K/V | 0.7003 | likely_pathogenic | 0.564 | ambiguous | -0.1 | Destabilizing | 0.866 | D | 0.738 | prob.delet. | None | None | None | None | I |
K/W | 0.9716 | likely_pathogenic | 0.9353 | pathogenic | -0.437 | Destabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/Y | 0.9371 | likely_pathogenic | 0.8866 | pathogenic | -0.102 | Destabilizing | 0.929 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.