Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9736 | 29431;29432;29433 | chr2:178706668;178706667;178706666 | chr2:179571395;179571394;179571393 |
N2AB | 9419 | 28480;28481;28482 | chr2:178706668;178706667;178706666 | chr2:179571395;179571394;179571393 |
N2A | 8492 | 25699;25700;25701 | chr2:178706668;178706667;178706666 | chr2:179571395;179571394;179571393 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/G | rs1229199576 | -0.29 | 1.0 | None | 0.606 | 0.48 | 0.36076525451 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
W/G | rs1229199576 | -0.29 | 1.0 | None | 0.606 | 0.48 | 0.36076525451 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | I | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9884 | likely_pathogenic | 0.9717 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
W/C | 0.9972 | likely_pathogenic | 0.9929 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
W/D | 0.9964 | likely_pathogenic | 0.9925 | pathogenic | 0.884 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
W/E | 0.9976 | likely_pathogenic | 0.9941 | pathogenic | 0.896 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
W/F | 0.7235 | likely_pathogenic | 0.6253 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
W/G | 0.9412 | likely_pathogenic | 0.8782 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | I |
W/H | 0.9913 | likely_pathogenic | 0.9827 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
W/I | 0.9808 | likely_pathogenic | 0.959 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
W/K | 0.9985 | likely_pathogenic | 0.9956 | pathogenic | 0.381 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
W/L | 0.9564 | likely_pathogenic | 0.9081 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | I |
W/M | 0.9851 | likely_pathogenic | 0.9651 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
W/N | 0.9941 | likely_pathogenic | 0.9866 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
W/P | 0.9972 | likely_pathogenic | 0.9926 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
W/Q | 0.9984 | likely_pathogenic | 0.9954 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
W/R | 0.9977 | likely_pathogenic | 0.9932 | pathogenic | 0.337 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
W/S | 0.9806 | likely_pathogenic | 0.9494 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
W/T | 0.9899 | likely_pathogenic | 0.9757 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
W/V | 0.9818 | likely_pathogenic | 0.9588 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
W/Y | 0.8903 | likely_pathogenic | 0.8234 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.