Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9739 | 29440;29441;29442 | chr2:178706659;178706658;178706657 | chr2:179571386;179571385;179571384 |
N2AB | 9422 | 28489;28490;28491 | chr2:178706659;178706658;178706657 | chr2:179571386;179571385;179571384 |
N2A | 8495 | 25708;25709;25710 | chr2:178706659;178706658;178706657 | chr2:179571386;179571385;179571384 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.997 | None | 0.781 | 0.688 | 0.857678863562 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9787 | likely_pathogenic | 0.9406 | pathogenic | -2.426 | Highly Destabilizing | 0.953 | D | 0.463 | neutral | None | None | None | None | N |
L/C | 0.9821 | likely_pathogenic | 0.9454 | pathogenic | -1.798 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9973 | pathogenic | -2.03 | Highly Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
L/E | 0.9937 | likely_pathogenic | 0.9805 | pathogenic | -1.852 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
L/F | 0.8774 | likely_pathogenic | 0.6379 | pathogenic | -1.456 | Destabilizing | 0.986 | D | 0.571 | neutral | None | None | None | None | N |
L/G | 0.9952 | likely_pathogenic | 0.9857 | pathogenic | -2.928 | Highly Destabilizing | 0.993 | D | 0.747 | deleterious | None | None | None | None | N |
L/H | 0.9893 | likely_pathogenic | 0.9588 | pathogenic | -2.051 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
L/I | 0.2557 | likely_benign | 0.1489 | benign | -1.01 | Destabilizing | 0.06 | N | 0.338 | neutral | None | None | None | None | N |
L/K | 0.9839 | likely_pathogenic | 0.9581 | pathogenic | -1.881 | Destabilizing | 0.993 | D | 0.692 | prob.neutral | None | None | None | None | N |
L/M | 0.4173 | ambiguous | 0.2609 | benign | -0.952 | Destabilizing | 0.58 | D | 0.41 | neutral | None | None | None | None | N |
L/N | 0.9948 | likely_pathogenic | 0.9822 | pathogenic | -2.051 | Highly Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
L/P | 0.9939 | likely_pathogenic | 0.9783 | pathogenic | -1.459 | Destabilizing | 0.997 | D | 0.781 | deleterious | None | None | None | None | N |
L/Q | 0.9763 | likely_pathogenic | 0.9224 | pathogenic | -1.977 | Destabilizing | 0.991 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/R | 0.9796 | likely_pathogenic | 0.9435 | pathogenic | -1.493 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/S | 0.9965 | likely_pathogenic | 0.984 | pathogenic | -2.823 | Highly Destabilizing | 0.993 | D | 0.662 | neutral | None | None | None | None | N |
L/T | 0.9816 | likely_pathogenic | 0.944 | pathogenic | -2.487 | Highly Destabilizing | 0.986 | D | 0.585 | neutral | None | None | None | None | N |
L/V | 0.4618 | ambiguous | 0.2768 | benign | -1.459 | Destabilizing | 0.76 | D | 0.475 | neutral | None | None | None | None | N |
L/W | 0.9622 | likely_pathogenic | 0.8484 | pathogenic | -1.626 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/Y | 0.9812 | likely_pathogenic | 0.931 | pathogenic | -1.399 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.