Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 975 | 3148;3149;3150 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
N2AB | 975 | 3148;3149;3150 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
N2A | 975 | 3148;3149;3150 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
N2B | 929 | 3010;3011;3012 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
Novex-1 | 929 | 3010;3011;3012 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
Novex-2 | 929 | 3010;3011;3012 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
Novex-3 | 975 | 3148;3149;3150 | chr2:178782983;178782982;178782981 | chr2:179647710;179647709;179647708 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2092909709 | None | None | N | 0.165 | 0.216 | 0.238705975628 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14422E-04 | 0 |
T/A | rs2092909709 | None | None | N | 0.165 | 0.216 | 0.238705975628 | gnomAD-4.0.0 | 3.84149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.02015E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1312 | likely_benign | 0.1351 | benign | -1.0 | Destabilizing | None | N | 0.165 | neutral | N | 0.510637132 | None | None | N |
T/C | 0.6007 | likely_pathogenic | 0.5965 | pathogenic | -0.481 | Destabilizing | 0.667 | D | 0.507 | neutral | None | None | None | None | N |
T/D | 0.6557 | likely_pathogenic | 0.672 | pathogenic | -0.287 | Destabilizing | 0.364 | N | 0.523 | neutral | None | None | None | None | N |
T/E | 0.4705 | ambiguous | 0.481 | ambiguous | -0.214 | Destabilizing | 0.22 | N | 0.494 | neutral | None | None | None | None | N |
T/F | 0.3447 | ambiguous | 0.3505 | ambiguous | -0.827 | Destabilizing | 0.22 | N | 0.536 | neutral | None | None | None | None | N |
T/G | 0.5079 | ambiguous | 0.5352 | ambiguous | -1.336 | Destabilizing | 0.055 | N | 0.463 | neutral | None | None | None | None | N |
T/H | 0.2874 | likely_benign | 0.2908 | benign | -1.472 | Destabilizing | 0.859 | D | 0.545 | neutral | None | None | None | None | N |
T/I | 0.1832 | likely_benign | 0.1813 | benign | -0.168 | Destabilizing | None | N | 0.231 | neutral | N | 0.510162011 | None | None | N |
T/K | 0.2029 | likely_benign | 0.1996 | benign | -0.662 | Destabilizing | 0.175 | N | 0.475 | neutral | N | 0.502194723 | None | None | N |
T/L | 0.1263 | likely_benign | 0.127 | benign | -0.168 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
T/M | 0.0854 | likely_benign | 0.084 | benign | 0.034 | Stabilizing | 0.002 | N | 0.237 | neutral | None | None | None | None | N |
T/N | 0.2073 | likely_benign | 0.206 | benign | -0.794 | Destabilizing | 0.364 | N | 0.475 | neutral | None | None | None | None | N |
T/P | 0.8775 | likely_pathogenic | 0.9069 | pathogenic | -0.412 | Destabilizing | 0.301 | N | 0.522 | neutral | D | 0.667661124 | None | None | N |
T/Q | 0.2495 | likely_benign | 0.2462 | benign | -0.796 | Destabilizing | 0.22 | N | 0.551 | neutral | None | None | None | None | N |
T/R | 0.168 | likely_benign | 0.1705 | benign | -0.569 | Destabilizing | 0.175 | N | 0.523 | neutral | N | 0.486797195 | None | None | N |
T/S | 0.1468 | likely_benign | 0.1489 | benign | -1.125 | Destabilizing | 0.042 | N | 0.411 | neutral | N | 0.462418085 | None | None | N |
T/V | 0.157 | likely_benign | 0.1587 | benign | -0.412 | Destabilizing | None | N | 0.165 | neutral | None | None | None | None | N |
T/W | 0.7223 | likely_pathogenic | 0.7393 | pathogenic | -0.803 | Destabilizing | 0.958 | D | 0.554 | neutral | None | None | None | None | N |
T/Y | 0.42 | ambiguous | 0.4195 | ambiguous | -0.553 | Destabilizing | 0.667 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.