Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9750 | 29473;29474;29475 | chr2:178706626;178706625;178706624 | chr2:179571353;179571352;179571351 |
N2AB | 9433 | 28522;28523;28524 | chr2:178706626;178706625;178706624 | chr2:179571353;179571352;179571351 |
N2A | 8506 | 25741;25742;25743 | chr2:178706626;178706625;178706624 | chr2:179571353;179571352;179571351 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.993 | None | 0.616 | 0.273 | 0.261217442401 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6597 | likely_pathogenic | 0.4984 | ambiguous | 0.078 | Stabilizing | 0.983 | D | 0.523 | neutral | None | None | None | None | N |
K/C | 0.911 | likely_pathogenic | 0.8586 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/D | 0.7756 | likely_pathogenic | 0.658 | pathogenic | -0.036 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
K/E | 0.3405 | ambiguous | 0.2524 | benign | -0.031 | Destabilizing | 0.977 | D | 0.491 | neutral | None | None | None | None | N |
K/F | 0.9289 | likely_pathogenic | 0.8677 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/G | 0.8112 | likely_pathogenic | 0.6605 | pathogenic | -0.124 | Destabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | N |
K/H | 0.4601 | ambiguous | 0.3871 | ambiguous | -0.422 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
K/I | 0.5358 | ambiguous | 0.4528 | ambiguous | 0.534 | Stabilizing | 0.997 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/L | 0.6608 | likely_pathogenic | 0.5299 | ambiguous | 0.534 | Stabilizing | 0.995 | D | 0.537 | neutral | None | None | None | None | N |
K/M | 0.4751 | ambiguous | 0.3503 | ambiguous | 0.294 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
K/N | 0.6044 | likely_pathogenic | 0.4804 | ambiguous | 0.365 | Stabilizing | 0.993 | D | 0.616 | neutral | None | None | None | None | N |
K/P | 0.9802 | likely_pathogenic | 0.9282 | pathogenic | 0.41 | Stabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
K/Q | 0.2097 | likely_benign | 0.1685 | benign | 0.194 | Stabilizing | 0.993 | D | 0.613 | neutral | None | None | None | None | N |
K/R | 0.0996 | likely_benign | 0.0902 | benign | 0.028 | Stabilizing | 0.235 | N | 0.277 | neutral | None | None | None | None | N |
K/S | 0.6719 | likely_pathogenic | 0.538 | ambiguous | -0.061 | Destabilizing | 0.983 | D | 0.529 | neutral | None | None | None | None | N |
K/T | 0.3826 | ambiguous | 0.2773 | benign | 0.087 | Stabilizing | 0.997 | D | 0.602 | neutral | None | None | None | None | N |
K/V | 0.5135 | ambiguous | 0.4376 | ambiguous | 0.41 | Stabilizing | 0.998 | D | 0.63 | neutral | None | None | None | None | N |
K/W | 0.9167 | likely_pathogenic | 0.838 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Y | 0.8409 | likely_pathogenic | 0.7527 | pathogenic | 0.191 | Stabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.