Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9751 | 29476;29477;29478 | chr2:178706623;178706622;178706621 | chr2:179571350;179571349;179571348 |
N2AB | 9434 | 28525;28526;28527 | chr2:178706623;178706622;178706621 | chr2:179571350;179571349;179571348 |
N2A | 8507 | 25744;25745;25746 | chr2:178706623;178706622;178706621 | chr2:179571350;179571349;179571348 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs779884658 | -0.149 | 0.994 | None | 0.796 | 0.339 | 0.386395597597 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
G/V | rs779884658 | -0.149 | 0.994 | None | 0.796 | 0.339 | 0.386395597597 | gnomAD-4.0.0 | 8.89413E-06 | None | None | None | None | I | None | 0 | 2.23604E-05 | None | 0 | 0 | None | 0 | 0 | 2.69828E-06 | 1.04343E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4889 | ambiguous | 0.3129 | benign | -0.324 | Destabilizing | 0.961 | D | 0.521 | neutral | None | None | None | None | I |
G/C | 0.8248 | likely_pathogenic | 0.6377 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
G/D | 0.4058 | ambiguous | 0.2772 | benign | -1.001 | Destabilizing | 0.153 | N | 0.528 | neutral | None | None | None | None | I |
G/E | 0.549 | ambiguous | 0.3613 | ambiguous | -1.174 | Destabilizing | 0.983 | D | 0.721 | prob.delet. | None | None | None | None | I |
G/F | 0.9549 | likely_pathogenic | 0.8786 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
G/H | 0.8817 | likely_pathogenic | 0.7503 | pathogenic | -0.654 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
G/I | 0.9188 | likely_pathogenic | 0.7541 | pathogenic | -0.47 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
G/K | 0.8244 | likely_pathogenic | 0.6806 | pathogenic | -0.987 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | None | None | None | None | I |
G/L | 0.9123 | likely_pathogenic | 0.7941 | pathogenic | -0.47 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | I |
G/M | 0.9182 | likely_pathogenic | 0.8035 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
G/N | 0.5708 | likely_pathogenic | 0.4098 | ambiguous | -0.519 | Destabilizing | 0.983 | D | 0.677 | prob.neutral | None | None | None | None | I |
G/P | 0.9856 | likely_pathogenic | 0.9497 | pathogenic | -0.388 | Destabilizing | 0.996 | D | 0.764 | deleterious | None | None | None | None | I |
G/Q | 0.7925 | likely_pathogenic | 0.6107 | pathogenic | -0.861 | Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | I |
G/R | 0.786 | likely_pathogenic | 0.574 | pathogenic | -0.46 | Destabilizing | 0.989 | D | 0.775 | deleterious | None | None | None | None | I |
G/S | 0.3769 | ambiguous | 0.2249 | benign | -0.579 | Destabilizing | 0.978 | D | 0.629 | neutral | None | None | None | None | I |
G/T | 0.7555 | likely_pathogenic | 0.5202 | ambiguous | -0.7 | Destabilizing | 0.991 | D | 0.728 | prob.delet. | None | None | None | None | I |
G/V | 0.8311 | likely_pathogenic | 0.5843 | pathogenic | -0.388 | Destabilizing | 0.994 | D | 0.796 | deleterious | None | None | None | None | I |
G/W | 0.882 | likely_pathogenic | 0.7023 | pathogenic | -1.264 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
G/Y | 0.8896 | likely_pathogenic | 0.7407 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.