Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9763 | 29512;29513;29514 | chr2:178706587;178706586;178706585 | chr2:179571314;179571313;179571312 |
N2AB | 9446 | 28561;28562;28563 | chr2:178706587;178706586;178706585 | chr2:179571314;179571313;179571312 |
N2A | 8519 | 25780;25781;25782 | chr2:178706587;178706586;178706585 | chr2:179571314;179571313;179571312 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1414221406 | None | 0.996 | None | 0.483 | 0.295 | 0.244539031024 | gnomAD-4.0.0 | 1.59099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8578E-06 | 0 | 0 |
K/N | rs1301356747 | 0.526 | 0.999 | None | 0.607 | 0.197 | 0.117506650769 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
K/N | rs1301356747 | 0.526 | 0.999 | None | 0.607 | 0.197 | 0.117506650769 | gnomAD-4.0.0 | 3.18214E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85801E-06 | 0 | 3.02352E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8724 | likely_pathogenic | 0.6442 | pathogenic | -0.116 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
K/C | 0.9877 | likely_pathogenic | 0.9519 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/D | 0.9793 | likely_pathogenic | 0.9108 | pathogenic | 0.05 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
K/E | 0.8232 | likely_pathogenic | 0.4981 | ambiguous | 0.057 | Stabilizing | 0.996 | D | 0.483 | neutral | None | None | None | None | N |
K/F | 0.9893 | likely_pathogenic | 0.9509 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/G | 0.9306 | likely_pathogenic | 0.7676 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.518 | neutral | None | None | None | None | N |
K/H | 0.8767 | likely_pathogenic | 0.7147 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
K/I | 0.9117 | likely_pathogenic | 0.6862 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
K/L | 0.8728 | likely_pathogenic | 0.661 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.518 | neutral | None | None | None | None | N |
K/M | 0.8451 | likely_pathogenic | 0.5638 | ambiguous | 0.339 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/N | 0.9503 | likely_pathogenic | 0.8083 | pathogenic | 0.175 | Stabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
K/P | 0.926 | likely_pathogenic | 0.8043 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
K/Q | 0.6095 | likely_pathogenic | 0.3493 | ambiguous | -0.056 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
K/R | 0.1278 | likely_benign | 0.0986 | benign | -0.089 | Destabilizing | 0.64 | D | 0.308 | neutral | None | None | None | None | N |
K/S | 0.9317 | likely_pathogenic | 0.7645 | pathogenic | -0.372 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | N |
K/T | 0.8307 | likely_pathogenic | 0.5293 | ambiguous | -0.21 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | N |
K/V | 0.8601 | likely_pathogenic | 0.6251 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
K/W | 0.9853 | likely_pathogenic | 0.9473 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/Y | 0.974 | likely_pathogenic | 0.9097 | pathogenic | 0.083 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.