Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9764 | 29515;29516;29517 | chr2:178706584;178706583;178706582 | chr2:179571311;179571310;179571309 |
N2AB | 9447 | 28564;28565;28566 | chr2:178706584;178706583;178706582 | chr2:179571311;179571310;179571309 |
N2A | 8520 | 25783;25784;25785 | chr2:178706584;178706583;178706582 | chr2:179571311;179571310;179571309 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.994 | None | 0.417 | 0.326 | 0.259272394797 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
T/S | None | None | 0.287 | None | 0.174 | 0.16 | 0.0611884634855 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2939 | likely_benign | 0.1856 | benign | -0.334 | Destabilizing | 0.835 | D | 0.344 | neutral | None | None | None | None | N |
T/C | 0.9625 | likely_pathogenic | 0.9006 | pathogenic | -0.12 | Destabilizing | 1.0 | D | 0.446 | neutral | None | None | None | None | N |
T/D | 0.8856 | likely_pathogenic | 0.7661 | pathogenic | 0.234 | Stabilizing | 0.97 | D | 0.387 | neutral | None | None | None | None | N |
T/E | 0.8434 | likely_pathogenic | 0.6742 | pathogenic | 0.14 | Stabilizing | 0.97 | D | 0.394 | neutral | None | None | None | None | N |
T/F | 0.8726 | likely_pathogenic | 0.6885 | pathogenic | -0.988 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
T/G | 0.5655 | likely_pathogenic | 0.4651 | ambiguous | -0.408 | Destabilizing | 0.97 | D | 0.404 | neutral | None | None | None | None | N |
T/H | 0.8295 | likely_pathogenic | 0.6616 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | N |
T/I | 0.8 | likely_pathogenic | 0.5721 | pathogenic | -0.26 | Destabilizing | 0.994 | D | 0.417 | neutral | None | None | None | None | N |
T/K | 0.7247 | likely_pathogenic | 0.475 | ambiguous | -0.161 | Destabilizing | 0.97 | D | 0.387 | neutral | None | None | None | None | N |
T/L | 0.5302 | ambiguous | 0.3409 | ambiguous | -0.26 | Destabilizing | 0.985 | D | 0.383 | neutral | None | None | None | None | N |
T/M | 0.3139 | likely_benign | 0.1782 | benign | 0.046 | Stabilizing | 1.0 | D | 0.429 | neutral | None | None | None | None | N |
T/N | 0.4469 | ambiguous | 0.2945 | benign | 0.072 | Stabilizing | 0.961 | D | 0.363 | neutral | None | None | None | None | N |
T/P | 0.5585 | ambiguous | 0.4068 | ambiguous | -0.26 | Destabilizing | 0.994 | D | 0.42 | neutral | None | None | None | None | N |
T/Q | 0.6871 | likely_pathogenic | 0.4998 | ambiguous | -0.182 | Destabilizing | 0.996 | D | 0.424 | neutral | None | None | None | None | N |
T/R | 0.7044 | likely_pathogenic | 0.4135 | ambiguous | 0.06 | Stabilizing | 0.996 | D | 0.435 | neutral | None | None | None | None | N |
T/S | 0.3018 | likely_benign | 0.2255 | benign | -0.132 | Destabilizing | 0.287 | N | 0.174 | neutral | None | None | None | None | N |
T/V | 0.6383 | likely_pathogenic | 0.448 | ambiguous | -0.26 | Destabilizing | 0.985 | D | 0.351 | neutral | None | None | None | None | N |
T/W | 0.948 | likely_pathogenic | 0.8524 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
T/Y | 0.8438 | likely_pathogenic | 0.6623 | pathogenic | -0.706 | Destabilizing | 0.999 | D | 0.548 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.