Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9768 | 29527;29528;29529 | chr2:178706572;178706571;178706570 | chr2:179571299;179571298;179571297 |
N2AB | 9451 | 28576;28577;28578 | chr2:178706572;178706571;178706570 | chr2:179571299;179571298;179571297 |
N2A | 8524 | 25795;25796;25797 | chr2:178706572;178706571;178706570 | chr2:179571299;179571298;179571297 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.927 | None | 0.478 | 0.289 | 0.151104730317 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4432 | ambiguous | 0.3081 | benign | -1.62 | Destabilizing | 0.329 | N | 0.381 | neutral | None | None | None | None | N |
L/C | 0.8084 | likely_pathogenic | 0.6633 | pathogenic | -1.009 | Destabilizing | 0.995 | D | 0.507 | neutral | None | None | None | None | N |
L/D | 0.8535 | likely_pathogenic | 0.7147 | pathogenic | -0.679 | Destabilizing | 0.704 | D | 0.511 | neutral | None | None | None | None | N |
L/E | 0.5918 | likely_pathogenic | 0.4211 | ambiguous | -0.678 | Destabilizing | 0.329 | N | 0.443 | neutral | None | None | None | None | N |
L/F | 0.2806 | likely_benign | 0.1735 | benign | -1.203 | Destabilizing | 0.927 | D | 0.478 | neutral | None | None | None | None | N |
L/G | 0.8039 | likely_pathogenic | 0.6158 | pathogenic | -1.936 | Destabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | N |
L/H | 0.4183 | ambiguous | 0.2639 | benign | -1.084 | Destabilizing | 0.944 | D | 0.55 | neutral | None | None | None | None | N |
L/I | 0.1172 | likely_benign | 0.0987 | benign | -0.834 | Destabilizing | 0.642 | D | 0.4 | neutral | None | None | None | None | N |
L/K | 0.4695 | ambiguous | 0.3251 | benign | -0.912 | Destabilizing | 0.329 | N | 0.46 | neutral | None | None | None | None | N |
L/M | 0.147 | likely_benign | 0.1171 | benign | -0.617 | Destabilizing | 0.944 | D | 0.49 | neutral | None | None | None | None | N |
L/N | 0.4541 | ambiguous | 0.3328 | benign | -0.727 | Destabilizing | 0.704 | D | 0.533 | neutral | None | None | None | None | N |
L/P | 0.7065 | likely_pathogenic | 0.4661 | ambiguous | -1.064 | Destabilizing | 0.003 | N | 0.391 | neutral | None | None | None | None | N |
L/Q | 0.2293 | likely_benign | 0.1599 | benign | -0.905 | Destabilizing | 0.004 | N | 0.296 | neutral | None | None | None | None | N |
L/R | 0.4109 | ambiguous | 0.2524 | benign | -0.349 | Destabilizing | 0.543 | D | 0.499 | neutral | None | None | None | None | N |
L/S | 0.4181 | ambiguous | 0.2645 | benign | -1.432 | Destabilizing | 0.27 | N | 0.453 | neutral | None | None | None | None | N |
L/T | 0.2811 | likely_benign | 0.2136 | benign | -1.309 | Destabilizing | 0.013 | N | 0.213 | neutral | None | None | None | None | N |
L/V | 0.1371 | likely_benign | 0.1116 | benign | -1.064 | Destabilizing | 0.27 | N | 0.425 | neutral | None | None | None | None | N |
L/W | 0.4936 | ambiguous | 0.2934 | benign | -1.226 | Destabilizing | 0.995 | D | 0.551 | neutral | None | None | None | None | N |
L/Y | 0.5888 | likely_pathogenic | 0.3972 | ambiguous | -0.995 | Destabilizing | 0.981 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.