Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 977 | 3154;3155;3156 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
N2AB | 977 | 3154;3155;3156 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
N2A | 977 | 3154;3155;3156 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
N2B | 931 | 3016;3017;3018 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
Novex-1 | 931 | 3016;3017;3018 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
Novex-2 | 931 | 3016;3017;3018 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
Novex-3 | 977 | 3154;3155;3156 | chr2:178782977;178782976;178782975 | chr2:179647704;179647703;179647702 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1305432524 | -1.384 | 0.999 | D | 0.714 | 0.625 | 0.845155949937 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
Y/C | rs1305432524 | -1.384 | 0.999 | D | 0.714 | 0.625 | 0.845155949937 | gnomAD-4.0.0 | 3.18107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71311E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9541 | likely_pathogenic | 0.9686 | pathogenic | -2.449 | Highly Destabilizing | 0.959 | D | 0.644 | neutral | None | None | None | None | N |
Y/C | 0.6987 | likely_pathogenic | 0.7559 | pathogenic | -1.118 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | D | 0.704306849 | None | None | N |
Y/D | 0.9139 | likely_pathogenic | 0.943 | pathogenic | -1.123 | Destabilizing | 0.995 | D | 0.725 | prob.delet. | D | 0.61435215 | None | None | N |
Y/E | 0.955 | likely_pathogenic | 0.9696 | pathogenic | -1.061 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
Y/F | 0.1042 | likely_benign | 0.1016 | benign | -1.253 | Destabilizing | 0.011 | N | 0.225 | neutral | N | 0.490595103 | None | None | N |
Y/G | 0.9333 | likely_pathogenic | 0.9536 | pathogenic | -2.745 | Highly Destabilizing | 0.988 | D | 0.699 | prob.neutral | None | None | None | None | N |
Y/H | 0.4876 | ambiguous | 0.5272 | ambiguous | -1.093 | Destabilizing | 0.995 | D | 0.603 | neutral | D | 0.566606762 | None | None | N |
Y/I | 0.851 | likely_pathogenic | 0.883 | pathogenic | -1.556 | Destabilizing | 0.851 | D | 0.632 | neutral | None | None | None | None | N |
Y/K | 0.9175 | likely_pathogenic | 0.9339 | pathogenic | -1.029 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
Y/L | 0.7892 | likely_pathogenic | 0.8194 | pathogenic | -1.556 | Destabilizing | 0.702 | D | 0.587 | neutral | None | None | None | None | N |
Y/M | 0.8577 | likely_pathogenic | 0.883 | pathogenic | -1.189 | Destabilizing | 0.988 | D | 0.705 | prob.neutral | None | None | None | None | N |
Y/N | 0.6562 | likely_pathogenic | 0.7119 | pathogenic | -1.199 | Destabilizing | 0.995 | D | 0.724 | prob.delet. | D | 0.603333791 | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -1.849 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
Y/Q | 0.885 | likely_pathogenic | 0.9139 | pathogenic | -1.277 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/R | 0.8506 | likely_pathogenic | 0.8825 | pathogenic | -0.438 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/S | 0.7538 | likely_pathogenic | 0.8117 | pathogenic | -1.819 | Destabilizing | 0.984 | D | 0.696 | prob.neutral | D | 0.525221966 | None | None | N |
Y/T | 0.8966 | likely_pathogenic | 0.9229 | pathogenic | -1.662 | Destabilizing | 0.988 | D | 0.694 | prob.neutral | None | None | None | None | N |
Y/V | 0.815 | likely_pathogenic | 0.8565 | pathogenic | -1.849 | Destabilizing | 0.919 | D | 0.569 | neutral | None | None | None | None | N |
Y/W | 0.6537 | likely_pathogenic | 0.6697 | pathogenic | -0.786 | Destabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.