Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9774 | 29545;29546;29547 | chr2:178706554;178706553;178706552 | chr2:179571281;179571280;179571279 |
N2AB | 9457 | 28594;28595;28596 | chr2:178706554;178706553;178706552 | chr2:179571281;179571280;179571279 |
N2A | 8530 | 25813;25814;25815 | chr2:178706554;178706553;178706552 | chr2:179571281;179571280;179571279 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs2075902617 | None | 0.851 | None | 0.536 | 0.326 | 0.689188209222 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/C | rs2075902617 | None | 0.851 | None | 0.536 | 0.326 | 0.689188209222 | gnomAD-4.0.0 | 6.57575E-06 | None | None | None | None | I | None | 2.41523E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6091 | likely_pathogenic | 0.5269 | ambiguous | -2.269 | Highly Destabilizing | 0.055 | N | 0.553 | neutral | None | None | None | None | I |
F/C | 0.5262 | ambiguous | 0.4613 | ambiguous | -0.881 | Destabilizing | 0.851 | D | 0.536 | neutral | None | None | None | None | I |
F/D | 0.9312 | likely_pathogenic | 0.8909 | pathogenic | -1.098 | Destabilizing | 0.124 | N | 0.592 | neutral | None | None | None | None | I |
F/E | 0.8874 | likely_pathogenic | 0.8499 | pathogenic | -1.048 | Destabilizing | 0.124 | N | 0.593 | neutral | None | None | None | None | I |
F/G | 0.8779 | likely_pathogenic | 0.8291 | pathogenic | -2.578 | Highly Destabilizing | 0.055 | N | 0.562 | neutral | None | None | None | None | I |
F/H | 0.6226 | likely_pathogenic | 0.5931 | pathogenic | -0.84 | Destabilizing | 0.497 | N | 0.491 | neutral | None | None | None | None | I |
F/I | 0.3989 | ambiguous | 0.2732 | benign | -1.351 | Destabilizing | 0.175 | N | 0.357 | neutral | None | None | None | None | I |
F/K | 0.836 | likely_pathogenic | 0.8018 | pathogenic | -1.066 | Destabilizing | 0.124 | N | 0.594 | neutral | None | None | None | None | I |
F/L | 0.9155 | likely_pathogenic | 0.8709 | pathogenic | -1.351 | Destabilizing | 0.042 | N | 0.304 | neutral | None | None | None | None | I |
F/M | 0.6467 | likely_pathogenic | 0.5515 | ambiguous | -0.892 | Destabilizing | 0.859 | D | 0.461 | neutral | None | None | None | None | I |
F/N | 0.7434 | likely_pathogenic | 0.6656 | pathogenic | -1.0 | Destabilizing | 0.004 | N | 0.396 | neutral | None | None | None | None | I |
F/P | 0.9992 | likely_pathogenic | 0.9986 | pathogenic | -1.65 | Destabilizing | 0.667 | D | 0.589 | neutral | None | None | None | None | I |
F/Q | 0.7865 | likely_pathogenic | 0.751 | pathogenic | -1.18 | Destabilizing | 0.497 | N | 0.585 | neutral | None | None | None | None | I |
F/R | 0.7424 | likely_pathogenic | 0.6906 | pathogenic | -0.289 | Destabilizing | 0.497 | N | 0.587 | neutral | None | None | None | None | I |
F/S | 0.3619 | ambiguous | 0.2979 | benign | -1.753 | Destabilizing | None | N | 0.287 | neutral | None | None | None | None | I |
F/T | 0.4463 | ambiguous | 0.3345 | benign | -1.618 | Destabilizing | 0.055 | N | 0.527 | neutral | None | None | None | None | I |
F/V | 0.3116 | likely_benign | 0.2294 | benign | -1.65 | Destabilizing | 0.175 | N | 0.467 | neutral | None | None | None | None | I |
F/W | 0.6385 | likely_pathogenic | 0.5712 | pathogenic | -0.623 | Destabilizing | 0.883 | D | 0.479 | neutral | None | None | None | None | I |
F/Y | 0.2377 | likely_benign | 0.2266 | benign | -0.788 | Destabilizing | 0.001 | N | 0.159 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.