Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9777 | 29554;29555;29556 | chr2:178706545;178706544;178706543 | chr2:179571272;179571271;179571270 |
N2AB | 9460 | 28603;28604;28605 | chr2:178706545;178706544;178706543 | chr2:179571272;179571271;179571270 |
N2A | 8533 | 25822;25823;25824 | chr2:178706545;178706544;178706543 | chr2:179571272;179571271;179571270 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs776520121 | 0.188 | 1.0 | None | 0.667 | 0.45 | 0.326616659874 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
H/R | rs776520121 | 0.188 | 1.0 | None | 0.667 | 0.45 | 0.326616659874 | gnomAD-4.0.0 | 6.1577E-06 | None | None | None | None | I | None | 2.98757E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.2962E-06 | 0 | 1.65634E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6456 | likely_pathogenic | 0.5329 | ambiguous | 0.393 | Stabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | I |
H/C | 0.5303 | ambiguous | 0.4306 | ambiguous | 0.623 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
H/D | 0.5939 | likely_pathogenic | 0.5176 | ambiguous | -0.134 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
H/E | 0.6815 | likely_pathogenic | 0.6006 | pathogenic | -0.129 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
H/F | 0.3907 | ambiguous | 0.3694 | ambiguous | 0.909 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
H/G | 0.7495 | likely_pathogenic | 0.6537 | pathogenic | 0.16 | Stabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
H/I | 0.735 | likely_pathogenic | 0.6582 | pathogenic | 0.967 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
H/K | 0.397 | ambiguous | 0.3878 | ambiguous | 0.296 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | I |
H/L | 0.3882 | ambiguous | 0.3106 | benign | 0.967 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
H/M | 0.7839 | likely_pathogenic | 0.731 | pathogenic | 0.682 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
H/N | 0.2452 | likely_benign | 0.2192 | benign | 0.23 | Stabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
H/P | 0.9428 | likely_pathogenic | 0.879 | pathogenic | 0.8 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
H/Q | 0.4336 | ambiguous | 0.3699 | ambiguous | 0.291 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
H/R | 0.2243 | likely_benign | 0.1912 | benign | -0.195 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
H/S | 0.6161 | likely_pathogenic | 0.5157 | ambiguous | 0.347 | Stabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
H/T | 0.7002 | likely_pathogenic | 0.6307 | pathogenic | 0.445 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
H/V | 0.6684 | likely_pathogenic | 0.5828 | pathogenic | 0.8 | Stabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
H/W | 0.6791 | likely_pathogenic | 0.5928 | pathogenic | 0.815 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
H/Y | 0.1633 | likely_benign | 0.1344 | benign | 1.1 | Stabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.