Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9784 | 29575;29576;29577 | chr2:178706524;178706523;178706522 | chr2:179571251;179571250;179571249 |
N2AB | 9467 | 28624;28625;28626 | chr2:178706524;178706523;178706522 | chr2:179571251;179571250;179571249 |
N2A | 8540 | 25843;25844;25845 | chr2:178706524;178706523;178706522 | chr2:179571251;179571250;179571249 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2075899130 | None | 0.001 | None | 0.114 | 0.12 | 0.315314060047 | gnomAD-4.0.0 | 2.05255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.4785E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4436 | ambiguous | 0.2968 | benign | -1.853 | Destabilizing | 0.001 | N | 0.127 | neutral | None | None | None | None | N |
V/C | 0.8756 | likely_pathogenic | 0.8353 | pathogenic | -1.451 | Destabilizing | 0.836 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/D | 0.9899 | likely_pathogenic | 0.9697 | pathogenic | -2.015 | Highly Destabilizing | 0.351 | N | 0.797 | deleterious | None | None | None | None | N |
V/E | 0.9835 | likely_pathogenic | 0.9512 | pathogenic | -1.843 | Destabilizing | 0.418 | N | 0.73 | prob.delet. | None | None | None | None | N |
V/F | 0.8754 | likely_pathogenic | 0.746 | pathogenic | -1.151 | Destabilizing | 0.655 | D | 0.759 | deleterious | None | None | None | None | N |
V/G | 0.7551 | likely_pathogenic | 0.5523 | ambiguous | -2.359 | Highly Destabilizing | 0.213 | N | 0.709 | prob.delet. | None | None | None | None | N |
V/H | 0.9954 | likely_pathogenic | 0.986 | pathogenic | -2.052 | Highly Destabilizing | 0.983 | D | 0.741 | deleterious | None | None | None | None | N |
V/I | 0.227 | likely_benign | 0.1658 | benign | -0.473 | Destabilizing | 0.001 | N | 0.114 | neutral | None | None | None | None | N |
V/K | 0.9907 | likely_pathogenic | 0.9709 | pathogenic | -1.434 | Destabilizing | 0.418 | N | 0.737 | prob.delet. | None | None | None | None | N |
V/L | 0.8724 | likely_pathogenic | 0.7273 | pathogenic | -0.473 | Destabilizing | 0.037 | N | 0.414 | neutral | None | None | None | None | N |
V/M | 0.7833 | likely_pathogenic | 0.5775 | pathogenic | -0.519 | Destabilizing | 0.716 | D | 0.657 | neutral | None | None | None | None | N |
V/N | 0.9726 | likely_pathogenic | 0.9247 | pathogenic | -1.612 | Destabilizing | 0.716 | D | 0.799 | deleterious | None | None | None | None | N |
V/P | 0.9966 | likely_pathogenic | 0.9914 | pathogenic | -0.902 | Destabilizing | 0.836 | D | 0.773 | deleterious | None | None | None | None | N |
V/Q | 0.9789 | likely_pathogenic | 0.9389 | pathogenic | -1.52 | Destabilizing | 0.836 | D | 0.749 | deleterious | None | None | None | None | N |
V/R | 0.9786 | likely_pathogenic | 0.9417 | pathogenic | -1.241 | Destabilizing | 0.836 | D | 0.795 | deleterious | None | None | None | None | N |
V/S | 0.7655 | likely_pathogenic | 0.5816 | pathogenic | -2.288 | Highly Destabilizing | 0.027 | N | 0.477 | neutral | None | None | None | None | N |
V/T | 0.6037 | likely_pathogenic | 0.4084 | ambiguous | -1.97 | Destabilizing | 0.004 | N | 0.139 | neutral | None | None | None | None | N |
V/W | 0.9983 | likely_pathogenic | 0.9942 | pathogenic | -1.582 | Destabilizing | 0.983 | D | 0.741 | deleterious | None | None | None | None | N |
V/Y | 0.9904 | likely_pathogenic | 0.9766 | pathogenic | -1.19 | Destabilizing | 0.836 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.