Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 981 | 3166;3167;3168 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
N2AB | 981 | 3166;3167;3168 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
N2A | 981 | 3166;3167;3168 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
N2B | 935 | 3028;3029;3030 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
Novex-1 | 935 | 3028;3029;3030 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
Novex-2 | 935 | 3028;3029;3030 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
Novex-3 | 981 | 3166;3167;3168 | chr2:178782965;178782964;178782963 | chr2:179647692;179647691;179647690 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1312572604 | 0.219 | 1.0 | N | 0.663 | 0.583 | 0.696195976467 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.62E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9207 | likely_pathogenic | 0.9257 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | N |
Y/C | 0.6933 | likely_pathogenic | 0.7178 | pathogenic | 0.125 | Stabilizing | 1.0 | D | 0.663 | neutral | N | 0.493779559 | None | None | N |
Y/D | 0.8276 | likely_pathogenic | 0.8473 | pathogenic | 0.727 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.39562811 | None | None | N |
Y/E | 0.956 | likely_pathogenic | 0.9609 | pathogenic | 0.712 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
Y/F | 0.2588 | likely_benign | 0.2451 | benign | -0.227 | Destabilizing | 0.999 | D | 0.57 | neutral | N | 0.459565853 | None | None | N |
Y/G | 0.8935 | likely_pathogenic | 0.907 | pathogenic | -0.74 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
Y/H | 0.7677 | likely_pathogenic | 0.7763 | pathogenic | 0.265 | Stabilizing | 1.0 | D | 0.643 | neutral | N | 0.436124171 | None | None | N |
Y/I | 0.8834 | likely_pathogenic | 0.8839 | pathogenic | -0.097 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
Y/K | 0.9627 | likely_pathogenic | 0.9653 | pathogenic | 0.163 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
Y/L | 0.8254 | likely_pathogenic | 0.834 | pathogenic | -0.097 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
Y/M | 0.9115 | likely_pathogenic | 0.9147 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
Y/N | 0.6896 | likely_pathogenic | 0.7049 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.424363004 | None | None | N |
Y/P | 0.9957 | likely_pathogenic | 0.9961 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
Y/Q | 0.9466 | likely_pathogenic | 0.9519 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
Y/R | 0.9048 | likely_pathogenic | 0.9122 | pathogenic | 0.348 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
Y/S | 0.6934 | likely_pathogenic | 0.7176 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.363944507 | None | None | N |
Y/T | 0.8717 | likely_pathogenic | 0.8775 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
Y/V | 0.8085 | likely_pathogenic | 0.812 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
Y/W | 0.8067 | likely_pathogenic | 0.8072 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.