Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9900 | 29923;29924;29925 | chr2:178704774;178704773;178704772 | chr2:179569501;179569500;179569499 |
N2AB | 9583 | 28972;28973;28974 | chr2:178704774;178704773;178704772 | chr2:179569501;179569500;179569499 |
N2A | 8656 | 26191;26192;26193 | chr2:178704774;178704773;178704772 | chr2:179569501;179569500;179569499 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.892 | None | 0.506 | 0.431 | 0.672779776643 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs2075588711 | None | 0.025 | None | 0.269 | 0.124 | 0.422040124859 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs2075588711 | None | 0.025 | None | 0.269 | 0.124 | 0.422040124859 | gnomAD-4.0.0 | 6.44375E-06 | None | None | None | None | I | None | 6.78702E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.85649E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9606 | likely_pathogenic | 0.9492 | pathogenic | -1.82 | Destabilizing | 0.892 | D | 0.506 | neutral | None | None | None | None | I |
V/C | 0.9903 | likely_pathogenic | 0.9903 | pathogenic | -1.029 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
V/D | 0.9984 | likely_pathogenic | 0.9977 | pathogenic | -2.021 | Highly Destabilizing | 0.994 | D | 0.705 | prob.neutral | None | None | None | None | I |
V/E | 0.9937 | likely_pathogenic | 0.9901 | pathogenic | -1.954 | Destabilizing | 0.996 | D | 0.648 | neutral | None | None | None | None | I |
V/F | 0.9312 | likely_pathogenic | 0.918 | pathogenic | -1.301 | Destabilizing | 0.967 | D | 0.644 | neutral | None | None | None | None | I |
V/G | 0.9858 | likely_pathogenic | 0.9784 | pathogenic | -2.209 | Highly Destabilizing | 0.983 | D | 0.702 | prob.neutral | None | None | None | None | I |
V/H | 0.9988 | likely_pathogenic | 0.9982 | pathogenic | -1.928 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
V/I | 0.1084 | likely_benign | 0.1304 | benign | -0.804 | Destabilizing | 0.025 | N | 0.269 | neutral | None | None | None | None | I |
V/K | 0.995 | likely_pathogenic | 0.9915 | pathogenic | -1.69 | Destabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | I |
V/L | 0.8007 | likely_pathogenic | 0.816 | pathogenic | -0.804 | Destabilizing | 0.369 | N | 0.437 | neutral | None | None | None | None | I |
V/M | 0.8267 | likely_pathogenic | 0.8291 | pathogenic | -0.504 | Destabilizing | 0.975 | D | 0.651 | neutral | None | None | None | None | I |
V/N | 0.9941 | likely_pathogenic | 0.994 | pathogenic | -1.508 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | I |
V/P | 0.9948 | likely_pathogenic | 0.9932 | pathogenic | -1.112 | Destabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | I |
V/Q | 0.9949 | likely_pathogenic | 0.9913 | pathogenic | -1.581 | Destabilizing | 0.996 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/R | 0.9914 | likely_pathogenic | 0.9847 | pathogenic | -1.242 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/S | 0.9865 | likely_pathogenic | 0.9845 | pathogenic | -1.988 | Destabilizing | 0.987 | D | 0.665 | neutral | None | None | None | None | I |
V/T | 0.9534 | likely_pathogenic | 0.9496 | pathogenic | -1.811 | Destabilizing | 0.916 | D | 0.561 | neutral | None | None | None | None | I |
V/W | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -1.651 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/Y | 0.9942 | likely_pathogenic | 0.9921 | pathogenic | -1.35 | Destabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.