Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9903 | 29932;29933;29934 | chr2:178704765;178704764;178704763 | chr2:179569492;179569491;179569490 |
N2AB | 9586 | 28981;28982;28983 | chr2:178704765;178704764;178704763 | chr2:179569492;179569491;179569490 |
N2A | 8659 | 26200;26201;26202 | chr2:178704765;178704764;178704763 | chr2:179569492;179569491;179569490 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1437200210 | None | 0.934 | None | 0.439 | 0.152 | 0.424430313326 | gnomAD-4.0.0 | 2.05823E-06 | None | None | None | None | I | None | 6.00348E-05 | 2.24669E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8593 | likely_pathogenic | 0.7887 | pathogenic | -0.918 | Destabilizing | 0.029 | N | 0.195 | neutral | None | None | None | None | I |
I/C | 0.9501 | likely_pathogenic | 0.9199 | pathogenic | -0.652 | Destabilizing | 0.998 | D | 0.398 | neutral | None | None | None | None | I |
I/D | 0.978 | likely_pathogenic | 0.9518 | pathogenic | -0.454 | Destabilizing | 0.974 | D | 0.436 | neutral | None | None | None | None | I |
I/E | 0.8678 | likely_pathogenic | 0.784 | pathogenic | -0.527 | Destabilizing | 0.974 | D | 0.401 | neutral | None | None | None | None | I |
I/F | 0.57 | likely_pathogenic | 0.4414 | ambiguous | -0.754 | Destabilizing | 0.934 | D | 0.398 | neutral | None | None | None | None | I |
I/G | 0.9681 | likely_pathogenic | 0.9364 | pathogenic | -1.128 | Destabilizing | 0.728 | D | 0.388 | neutral | None | None | None | None | I |
I/H | 0.8782 | likely_pathogenic | 0.8077 | pathogenic | -0.315 | Destabilizing | 0.998 | D | 0.409 | neutral | None | None | None | None | I |
I/K | 0.7214 | likely_pathogenic | 0.5835 | pathogenic | -0.602 | Destabilizing | 0.949 | D | 0.399 | neutral | None | None | None | None | I |
I/L | 0.2117 | likely_benign | 0.1875 | benign | -0.468 | Destabilizing | 0.005 | N | 0.142 | neutral | None | None | None | None | I |
I/M | 0.2424 | likely_benign | 0.2042 | benign | -0.42 | Destabilizing | 0.934 | D | 0.439 | neutral | None | None | None | None | I |
I/N | 0.7597 | likely_pathogenic | 0.6342 | pathogenic | -0.401 | Destabilizing | 0.989 | D | 0.433 | neutral | None | None | None | None | I |
I/P | 0.9924 | likely_pathogenic | 0.9762 | pathogenic | -0.585 | Destabilizing | 0.974 | D | 0.429 | neutral | None | None | None | None | I |
I/Q | 0.7598 | likely_pathogenic | 0.6517 | pathogenic | -0.634 | Destabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | I |
I/R | 0.6772 | likely_pathogenic | 0.5099 | ambiguous | 0.031 | Stabilizing | 0.974 | D | 0.436 | neutral | None | None | None | None | I |
I/S | 0.8319 | likely_pathogenic | 0.7268 | pathogenic | -0.882 | Destabilizing | 0.669 | D | 0.355 | neutral | None | None | None | None | I |
I/T | 0.6845 | likely_pathogenic | 0.5847 | pathogenic | -0.846 | Destabilizing | 0.801 | D | 0.371 | neutral | None | None | None | None | I |
I/V | 0.1561 | likely_benign | 0.1487 | benign | -0.585 | Destabilizing | 0.005 | N | 0.167 | neutral | None | None | None | None | I |
I/W | 0.9635 | likely_pathogenic | 0.9263 | pathogenic | -0.772 | Destabilizing | 0.998 | D | 0.45 | neutral | None | None | None | None | I |
I/Y | 0.8861 | likely_pathogenic | 0.8224 | pathogenic | -0.544 | Destabilizing | 0.991 | D | 0.412 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.