Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9907 | 29944;29945;29946 | chr2:178704753;178704752;178704751 | chr2:179569480;179569479;179569478 |
N2AB | 9590 | 28993;28994;28995 | chr2:178704753;178704752;178704751 | chr2:179569480;179569479;179569478 |
N2A | 8663 | 26212;26213;26214 | chr2:178704753;178704752;178704751 | chr2:179569480;179569479;179569478 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs771151409 | -0.205 | 0.625 | None | 0.381 | 0.071 | 0.386721274199 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4138 | ambiguous | 0.3707 | ambiguous | -0.42 | Destabilizing | 0.454 | N | 0.371 | neutral | None | None | None | None | N |
E/C | 0.9758 | likely_pathogenic | 0.9754 | pathogenic | -0.25 | Destabilizing | 0.998 | D | 0.382 | neutral | None | None | None | None | N |
E/D | 0.4436 | ambiguous | 0.4211 | ambiguous | -0.399 | Destabilizing | 0.625 | D | 0.381 | neutral | None | None | None | None | N |
E/F | 0.972 | likely_pathogenic | 0.963 | pathogenic | -0.155 | Destabilizing | 0.991 | D | 0.401 | neutral | None | None | None | None | N |
E/G | 0.4237 | ambiguous | 0.3636 | ambiguous | -0.653 | Destabilizing | 0.801 | D | 0.402 | neutral | None | None | None | None | N |
E/H | 0.8459 | likely_pathogenic | 0.8275 | pathogenic | 0.05 | Stabilizing | 0.974 | D | 0.387 | neutral | None | None | None | None | N |
E/I | 0.8112 | likely_pathogenic | 0.7786 | pathogenic | 0.173 | Stabilizing | 0.949 | D | 0.405 | neutral | None | None | None | None | N |
E/K | 0.322 | likely_benign | 0.2739 | benign | -0.013 | Destabilizing | 0.454 | N | 0.392 | neutral | None | None | None | None | N |
E/L | 0.8324 | likely_pathogenic | 0.8103 | pathogenic | 0.173 | Stabilizing | 0.842 | D | 0.391 | neutral | None | None | None | None | N |
E/M | 0.8578 | likely_pathogenic | 0.8328 | pathogenic | 0.182 | Stabilizing | 0.991 | D | 0.387 | neutral | None | None | None | None | N |
E/N | 0.6625 | likely_pathogenic | 0.6247 | pathogenic | -0.274 | Destabilizing | 0.842 | D | 0.337 | neutral | None | None | None | None | N |
E/P | 0.9569 | likely_pathogenic | 0.9422 | pathogenic | -0.004 | Destabilizing | 0.974 | D | 0.397 | neutral | None | None | None | None | N |
E/Q | 0.2637 | likely_benign | 0.2477 | benign | -0.21 | Destabilizing | 0.051 | N | 0.193 | neutral | None | None | None | None | N |
E/R | 0.5304 | ambiguous | 0.4664 | ambiguous | 0.306 | Stabilizing | 0.728 | D | 0.379 | neutral | None | None | None | None | N |
E/S | 0.4756 | ambiguous | 0.4311 | ambiguous | -0.489 | Destabilizing | 0.08 | N | 0.102 | neutral | None | None | None | None | N |
E/T | 0.5117 | ambiguous | 0.4584 | ambiguous | -0.303 | Destabilizing | 0.067 | N | 0.174 | neutral | None | None | None | None | N |
E/V | 0.6069 | likely_pathogenic | 0.5654 | pathogenic | -0.004 | Destabilizing | 0.801 | D | 0.397 | neutral | None | None | None | None | N |
E/W | 0.9899 | likely_pathogenic | 0.9871 | pathogenic | 0.016 | Stabilizing | 0.998 | D | 0.423 | neutral | None | None | None | None | N |
E/Y | 0.9462 | likely_pathogenic | 0.9361 | pathogenic | 0.08 | Stabilizing | 0.991 | D | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.