Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9908 | 29947;29948;29949 | chr2:178704750;178704749;178704748 | chr2:179569477;179569476;179569475 |
N2AB | 9591 | 28996;28997;28998 | chr2:178704750;178704749;178704748 | chr2:179569477;179569476;179569475 |
N2A | 8664 | 26215;26216;26217 | chr2:178704750;178704749;178704748 | chr2:179569477;179569476;179569475 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.334 | None | 0.385 | 0.168 | 0.128392430309 | gnomAD-4.0.0 | 1.59983E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8939 | likely_pathogenic | 0.7897 | pathogenic | -0.508 | Destabilizing | 0.617 | D | 0.397 | neutral | None | None | None | None | N |
N/C | 0.9508 | likely_pathogenic | 0.9117 | pathogenic | 0.27 | Stabilizing | 0.992 | D | 0.436 | neutral | None | None | None | None | N |
N/D | 0.2976 | likely_benign | 0.2298 | benign | 0.182 | Stabilizing | 0.001 | N | 0.096 | neutral | None | None | None | None | N |
N/E | 0.9038 | likely_pathogenic | 0.8277 | pathogenic | 0.174 | Stabilizing | 0.25 | N | 0.348 | neutral | None | None | None | None | N |
N/F | 0.9826 | likely_pathogenic | 0.9655 | pathogenic | -0.738 | Destabilizing | 0.739 | D | 0.456 | neutral | None | None | None | None | N |
N/G | 0.879 | likely_pathogenic | 0.7571 | pathogenic | -0.721 | Destabilizing | 0.4 | N | 0.349 | neutral | None | None | None | None | N |
N/H | 0.6906 | likely_pathogenic | 0.5114 | ambiguous | -0.656 | Destabilizing | 0.81 | D | 0.409 | neutral | None | None | None | None | N |
N/I | 0.9256 | likely_pathogenic | 0.8782 | pathogenic | -0.023 | Destabilizing | 0.81 | D | 0.452 | neutral | None | None | None | None | N |
N/K | 0.9516 | likely_pathogenic | 0.8903 | pathogenic | 0.066 | Stabilizing | 0.549 | D | 0.325 | neutral | None | None | None | None | N |
N/L | 0.9214 | likely_pathogenic | 0.8597 | pathogenic | -0.023 | Destabilizing | 0.447 | N | 0.457 | neutral | None | None | None | None | N |
N/M | 0.9378 | likely_pathogenic | 0.879 | pathogenic | 0.313 | Stabilizing | 0.992 | D | 0.407 | neutral | None | None | None | None | N |
N/P | 0.9265 | likely_pathogenic | 0.8802 | pathogenic | -0.156 | Destabilizing | 0.92 | D | 0.431 | neutral | None | None | None | None | N |
N/Q | 0.9407 | likely_pathogenic | 0.8784 | pathogenic | -0.41 | Destabilizing | 0.92 | D | 0.391 | neutral | None | None | None | None | N |
N/R | 0.9669 | likely_pathogenic | 0.9361 | pathogenic | 0.105 | Stabilizing | 0.92 | D | 0.393 | neutral | None | None | None | None | N |
N/S | 0.3923 | ambiguous | 0.2443 | benign | -0.265 | Destabilizing | 0.334 | N | 0.385 | neutral | None | None | None | None | N |
N/T | 0.7328 | likely_pathogenic | 0.562 | ambiguous | -0.109 | Destabilizing | 0.712 | D | 0.329 | neutral | None | None | None | None | N |
N/V | 0.9343 | likely_pathogenic | 0.8841 | pathogenic | -0.156 | Destabilizing | 0.85 | D | 0.458 | neutral | None | None | None | None | N |
N/W | 0.9936 | likely_pathogenic | 0.9883 | pathogenic | -0.645 | Destabilizing | 0.977 | D | 0.452 | neutral | None | None | None | None | N |
N/Y | 0.7871 | likely_pathogenic | 0.6698 | pathogenic | -0.405 | Destabilizing | 0.004 | N | 0.273 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.