Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9916 | 29971;29972;29973 | chr2:178704726;178704725;178704724 | chr2:179569453;179569452;179569451 |
N2AB | 9599 | 29020;29021;29022 | chr2:178704726;178704725;178704724 | chr2:179569453;179569452;179569451 |
N2A | 8672 | 26239;26240;26241 | chr2:178704726;178704725;178704724 | chr2:179569453;179569452;179569451 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs990983452 | -0.544 | None | None | 0.118 | 0.029 | 0.208816687407 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs990983452 | -0.544 | None | None | 0.118 | 0.029 | 0.208816687407 | gnomAD-4.0.0 | 6.85456E-07 | None | None | None | None | N | None | 0 | 2.24296E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs768314420 | -0.584 | 0.22 | None | 0.449 | 0.196 | 0.225215365344 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.67485E-04 | None | 0 | None | 0 | 0 | 0 |
D/G | rs768314420 | -0.584 | 0.22 | None | 0.449 | 0.196 | 0.225215365344 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs768314420 | -0.584 | 0.22 | None | 0.449 | 0.196 | 0.225215365344 | gnomAD-4.0.0 | 5.14235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 9.69556E-05 | None | 0 | 0 | 0 | 0 | 0 |
D/N | None | None | 0.22 | None | 0.449 | 0.176 | 0.240491677333 | gnomAD-4.0.0 | 1.59866E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96665E-05 | 0 | 0 | 0 | 0 |
D/V | rs768314420 | 0.248 | 0.001 | None | 0.403 | 0.221 | 0.31411915649 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
D/V | rs768314420 | 0.248 | 0.001 | None | 0.403 | 0.221 | 0.31411915649 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/V | rs768314420 | 0.248 | 0.001 | None | 0.403 | 0.221 | 0.31411915649 | gnomAD-4.0.0 | 3.59965E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.78689E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3342 | likely_benign | 0.5339 | ambiguous | -0.301 | Destabilizing | 0.124 | N | 0.525 | neutral | None | None | None | None | N |
D/C | 0.8483 | likely_pathogenic | 0.9374 | pathogenic | -0.007 | Destabilizing | 0.968 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/E | 0.2887 | likely_benign | 0.4671 | ambiguous | -0.656 | Destabilizing | None | N | 0.118 | neutral | None | None | None | None | N |
D/F | 0.8679 | likely_pathogenic | 0.9343 | pathogenic | -0.357 | Destabilizing | 0.726 | D | 0.669 | neutral | None | None | None | None | N |
D/G | 0.4634 | ambiguous | 0.6679 | pathogenic | -0.577 | Destabilizing | 0.22 | N | 0.449 | neutral | None | None | None | None | N |
D/H | 0.4955 | ambiguous | 0.693 | pathogenic | -0.705 | Destabilizing | 0.667 | D | 0.571 | neutral | None | None | None | None | N |
D/I | 0.6334 | likely_pathogenic | 0.809 | pathogenic | 0.394 | Stabilizing | 0.396 | N | 0.579 | neutral | None | None | None | None | N |
D/K | 0.6574 | likely_pathogenic | 0.8542 | pathogenic | -0.247 | Destabilizing | 0.157 | N | 0.455 | neutral | None | None | None | None | N |
D/L | 0.7267 | likely_pathogenic | 0.8663 | pathogenic | 0.394 | Stabilizing | 0.157 | N | 0.568 | neutral | None | None | None | None | N |
D/M | 0.8715 | likely_pathogenic | 0.9463 | pathogenic | 0.802 | Stabilizing | 0.909 | D | 0.663 | neutral | None | None | None | None | N |
D/N | 0.1648 | likely_benign | 0.2265 | benign | -0.469 | Destabilizing | 0.22 | N | 0.449 | neutral | None | None | None | None | N |
D/P | 0.8796 | likely_pathogenic | 0.9375 | pathogenic | 0.188 | Stabilizing | 0.726 | D | 0.533 | neutral | None | None | None | None | N |
D/Q | 0.6285 | likely_pathogenic | 0.8255 | pathogenic | -0.388 | Destabilizing | 0.396 | N | 0.432 | neutral | None | None | None | None | N |
D/R | 0.6931 | likely_pathogenic | 0.8754 | pathogenic | -0.199 | Destabilizing | 0.396 | N | 0.629 | neutral | None | None | None | None | N |
D/S | 0.232 | likely_benign | 0.3519 | ambiguous | -0.646 | Destabilizing | 0.157 | N | 0.393 | neutral | None | None | None | None | N |
D/T | 0.3938 | ambiguous | 0.5707 | pathogenic | -0.437 | Destabilizing | 0.272 | N | 0.49 | neutral | None | None | None | None | N |
D/V | 0.4122 | ambiguous | 0.626 | pathogenic | 0.188 | Stabilizing | 0.001 | N | 0.403 | neutral | None | None | None | None | N |
D/W | 0.973 | likely_pathogenic | 0.9882 | pathogenic | -0.336 | Destabilizing | 0.968 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/Y | 0.519 | ambiguous | 0.6948 | pathogenic | -0.173 | Destabilizing | 0.859 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.