Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9917 | 29974;29975;29976 | chr2:178704723;178704722;178704721 | chr2:179569450;179569449;179569448 |
N2AB | 9600 | 29023;29024;29025 | chr2:178704723;178704722;178704721 | chr2:179569450;179569449;179569448 |
N2A | 8673 | 26242;26243;26244 | chr2:178704723;178704722;178704721 | chr2:179569450;179569449;179569448 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.117 | None | 0.309 | 0.253 | 0.26169431596 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9044 | likely_pathogenic | 0.9236 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/D | 0.9848 | likely_pathogenic | 0.9916 | pathogenic | -1.815 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
A/E | 0.9828 | likely_pathogenic | 0.9888 | pathogenic | -1.727 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
A/F | 0.9843 | likely_pathogenic | 0.9848 | pathogenic | -0.919 | Destabilizing | 0.995 | D | 0.853 | deleterious | None | None | None | None | N |
A/G | 0.5801 | likely_pathogenic | 0.6392 | pathogenic | -1.504 | Destabilizing | 0.989 | D | 0.645 | neutral | None | None | None | None | N |
A/H | 0.9917 | likely_pathogenic | 0.994 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
A/I | 0.9447 | likely_pathogenic | 0.9313 | pathogenic | -0.122 | Destabilizing | 0.966 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/K | 0.9936 | likely_pathogenic | 0.996 | pathogenic | -1.388 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
A/L | 0.9215 | likely_pathogenic | 0.9207 | pathogenic | -0.122 | Destabilizing | 0.966 | D | 0.645 | neutral | None | None | None | None | N |
A/M | 0.9509 | likely_pathogenic | 0.9514 | pathogenic | -0.108 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
A/N | 0.978 | likely_pathogenic | 0.9867 | pathogenic | -1.327 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
A/P | 0.9798 | likely_pathogenic | 0.988 | pathogenic | -0.407 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
A/Q | 0.9815 | likely_pathogenic | 0.9872 | pathogenic | -1.309 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
A/R | 0.9761 | likely_pathogenic | 0.9826 | pathogenic | -1.236 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
A/S | 0.4143 | ambiguous | 0.5091 | ambiguous | -1.743 | Destabilizing | 0.989 | D | 0.641 | neutral | None | None | None | None | N |
A/T | 0.6474 | likely_pathogenic | 0.6938 | pathogenic | -1.542 | Destabilizing | 0.977 | D | 0.654 | neutral | None | None | None | None | N |
A/V | 0.7518 | likely_pathogenic | 0.7405 | pathogenic | -0.407 | Destabilizing | 0.117 | N | 0.309 | neutral | None | None | None | None | N |
A/W | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/Y | 0.9929 | likely_pathogenic | 0.9936 | pathogenic | -1.022 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.