Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9922 | 29989;29990;29991 | chr2:178704708;178704707;178704706 | chr2:179569435;179569434;179569433 |
N2AB | 9605 | 29038;29039;29040 | chr2:178704708;178704707;178704706 | chr2:179569435;179569434;179569433 |
N2A | 8678 | 26257;26258;26259 | chr2:178704708;178704707;178704706 | chr2:179569435;179569434;179569433 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.896 | None | 0.541 | 0.319 | 0.342865806769 | gnomAD-4.0.0 | 2.05623E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6998E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4732 | ambiguous | 0.4127 | ambiguous | -0.802 | Destabilizing | 0.379 | N | 0.534 | neutral | None | None | None | None | N |
D/C | 0.9169 | likely_pathogenic | 0.9064 | pathogenic | -0.569 | Destabilizing | 0.992 | D | 0.609 | neutral | None | None | None | None | N |
D/E | 0.394 | ambiguous | 0.4041 | ambiguous | -0.885 | Destabilizing | 0.001 | N | 0.204 | neutral | None | None | None | None | N |
D/F | 0.8985 | likely_pathogenic | 0.8777 | pathogenic | -0.614 | Destabilizing | 0.972 | D | 0.591 | neutral | None | None | None | None | N |
D/G | 0.7394 | likely_pathogenic | 0.6012 | pathogenic | -1.185 | Destabilizing | 0.549 | D | 0.517 | neutral | None | None | None | None | N |
D/H | 0.6779 | likely_pathogenic | 0.627 | pathogenic | -0.979 | Destabilizing | 0.896 | D | 0.541 | neutral | None | None | None | None | N |
D/I | 0.7169 | likely_pathogenic | 0.6567 | pathogenic | 0.232 | Stabilizing | 0.92 | D | 0.575 | neutral | None | None | None | None | N |
D/K | 0.86 | likely_pathogenic | 0.8091 | pathogenic | -1.102 | Destabilizing | 0.447 | N | 0.517 | neutral | None | None | None | None | N |
D/L | 0.751 | likely_pathogenic | 0.7324 | pathogenic | 0.232 | Stabilizing | 0.85 | D | 0.565 | neutral | None | None | None | None | N |
D/M | 0.9138 | likely_pathogenic | 0.9094 | pathogenic | 0.787 | Stabilizing | 0.992 | D | 0.581 | neutral | None | None | None | None | N |
D/N | 0.2566 | likely_benign | 0.2159 | benign | -1.354 | Destabilizing | 0.549 | D | 0.504 | neutral | None | None | None | None | N |
D/P | 0.9937 | likely_pathogenic | 0.9849 | pathogenic | -0.089 | Destabilizing | 0.92 | D | 0.52 | neutral | None | None | None | None | N |
D/Q | 0.7618 | likely_pathogenic | 0.7316 | pathogenic | -1.138 | Destabilizing | 0.447 | N | 0.49 | neutral | None | None | None | None | N |
D/R | 0.8573 | likely_pathogenic | 0.8055 | pathogenic | -1.018 | Destabilizing | 0.85 | D | 0.545 | neutral | None | None | None | None | N |
D/S | 0.3882 | ambiguous | 0.3362 | benign | -1.81 | Destabilizing | 0.447 | N | 0.538 | neutral | None | None | None | None | N |
D/T | 0.6478 | likely_pathogenic | 0.5701 | pathogenic | -1.483 | Destabilizing | 0.617 | D | 0.495 | neutral | None | None | None | None | N |
D/V | 0.5357 | ambiguous | 0.4728 | ambiguous | -0.089 | Destabilizing | 0.81 | D | 0.571 | neutral | None | None | None | None | N |
D/W | 0.9822 | likely_pathogenic | 0.9783 | pathogenic | -0.644 | Destabilizing | 0.992 | D | 0.609 | neutral | None | None | None | None | N |
D/Y | 0.6514 | likely_pathogenic | 0.5672 | pathogenic | -0.441 | Destabilizing | 0.963 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.