Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9923 | 29992;29993;29994 | chr2:178704705;178704704;178704703 | chr2:179569432;179569431;179569430 |
N2AB | 9606 | 29041;29042;29043 | chr2:178704705;178704704;178704703 | chr2:179569432;179569431;179569430 |
N2A | 8679 | 26260;26261;26262 | chr2:178704705;178704704;178704703 | chr2:179569432;179569431;179569430 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.989 | None | 0.761 | 0.599 | 0.746399086789 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9769 | likely_pathogenic | 0.9766 | pathogenic | -2.938 | Highly Destabilizing | 0.992 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/C | 0.9821 | likely_pathogenic | 0.9823 | pathogenic | -2.42 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
I/D | 0.9993 | likely_pathogenic | 0.9987 | pathogenic | -3.809 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
I/E | 0.9971 | likely_pathogenic | 0.9955 | pathogenic | -3.542 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/F | 0.8793 | likely_pathogenic | 0.8554 | pathogenic | -1.679 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
I/G | 0.997 | likely_pathogenic | 0.996 | pathogenic | -3.496 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
I/H | 0.9982 | likely_pathogenic | 0.9974 | pathogenic | -3.111 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
I/K | 0.994 | likely_pathogenic | 0.9907 | pathogenic | -2.458 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/L | 0.4654 | ambiguous | 0.4747 | ambiguous | -1.272 | Destabilizing | 0.889 | D | 0.442 | neutral | None | None | None | None | N |
I/M | 0.4715 | ambiguous | 0.4815 | ambiguous | -1.39 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/N | 0.9914 | likely_pathogenic | 0.9875 | pathogenic | -3.013 | Highly Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
I/P | 0.9993 | likely_pathogenic | 0.9986 | pathogenic | -1.817 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
I/Q | 0.9959 | likely_pathogenic | 0.9941 | pathogenic | -2.768 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/R | 0.9904 | likely_pathogenic | 0.9853 | pathogenic | -2.232 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/S | 0.9867 | likely_pathogenic | 0.9824 | pathogenic | -3.584 | Highly Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
I/T | 0.9722 | likely_pathogenic | 0.9707 | pathogenic | -3.178 | Highly Destabilizing | 0.989 | D | 0.761 | deleterious | None | None | None | None | N |
I/V | 0.28 | likely_benign | 0.3063 | benign | -1.817 | Destabilizing | 0.333 | N | 0.245 | neutral | None | None | None | None | N |
I/W | 0.9975 | likely_pathogenic | 0.9952 | pathogenic | -2.231 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
I/Y | 0.9883 | likely_pathogenic | 0.9823 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.