Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 993 | 3202;3203;3204 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
N2AB | 993 | 3202;3203;3204 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
N2A | 993 | 3202;3203;3204 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
N2B | 947 | 3064;3065;3066 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
Novex-1 | 947 | 3064;3065;3066 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
Novex-2 | 947 | 3064;3065;3066 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
Novex-3 | 993 | 3202;3203;3204 | chr2:178782929;178782928;178782927 | chr2:179647656;179647655;179647654 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs371838857 | -0.907 | 0.91 | N | 0.611 | 0.422 | 0.455173453901 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 1.23031E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/L | rs371838857 | -0.907 | 0.91 | N | 0.611 | 0.422 | 0.455173453901 | gnomAD-4.0.0 | 2.05223E-06 | None | None | None | None | N | None | 8.96164E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9709 | likely_pathogenic | 0.9874 | pathogenic | -2.08 | Highly Destabilizing | 0.985 | D | 0.673 | neutral | None | None | None | None | N |
F/C | 0.8986 | likely_pathogenic | 0.9467 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.480281456 | None | None | N |
F/D | 0.9906 | likely_pathogenic | 0.9959 | pathogenic | -0.497 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
F/E | 0.9898 | likely_pathogenic | 0.9958 | pathogenic | -0.414 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/G | 0.9869 | likely_pathogenic | 0.994 | pathogenic | -2.41 | Highly Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
F/H | 0.8934 | likely_pathogenic | 0.9294 | pathogenic | -0.773 | Destabilizing | 0.991 | D | 0.63 | neutral | None | None | None | None | N |
F/I | 0.8318 | likely_pathogenic | 0.9154 | pathogenic | -1.102 | Destabilizing | 0.98 | D | 0.618 | neutral | N | 0.471645818 | None | None | N |
F/K | 0.9902 | likely_pathogenic | 0.9954 | pathogenic | -1.01 | Destabilizing | 0.996 | D | 0.708 | prob.delet. | None | None | None | None | N |
F/L | 0.9816 | likely_pathogenic | 0.9898 | pathogenic | -1.102 | Destabilizing | 0.91 | D | 0.611 | neutral | N | 0.439807788 | None | None | N |
F/M | 0.9224 | likely_pathogenic | 0.9532 | pathogenic | -0.887 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
F/N | 0.9657 | likely_pathogenic | 0.9818 | pathogenic | -0.988 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/P | 0.999 | likely_pathogenic | 0.9995 | pathogenic | -1.42 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/Q | 0.9755 | likely_pathogenic | 0.9876 | pathogenic | -1.063 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/R | 0.9718 | likely_pathogenic | 0.9864 | pathogenic | -0.423 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
F/S | 0.9161 | likely_pathogenic | 0.9622 | pathogenic | -1.852 | Destabilizing | 0.994 | D | 0.649 | neutral | N | 0.45889649 | None | None | N |
F/T | 0.9555 | likely_pathogenic | 0.9807 | pathogenic | -1.677 | Destabilizing | 0.996 | D | 0.66 | neutral | None | None | None | None | N |
F/V | 0.8046 | likely_pathogenic | 0.9019 | pathogenic | -1.42 | Destabilizing | 0.961 | D | 0.635 | neutral | N | 0.428963225 | None | None | N |
F/W | 0.7797 | likely_pathogenic | 0.8326 | pathogenic | -0.289 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | N |
F/Y | 0.3094 | likely_benign | 0.3353 | benign | -0.463 | Destabilizing | 0.122 | N | 0.267 | neutral | N | 0.40884307 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.