Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9939 | 30040;30041;30042 | chr2:178704657;178704656;178704655 | chr2:179569384;179569383;179569382 |
N2AB | 9622 | 29089;29090;29091 | chr2:178704657;178704656;178704655 | chr2:179569384;179569383;179569382 |
N2A | 8695 | 26308;26309;26310 | chr2:178704657;178704656;178704655 | chr2:179569384;179569383;179569382 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs727503638 | 0.144 | 0.003 | None | 0.136 | 0.149 | 0.216624796971 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.91E-05 | None | 0 | 0 | 0 |
E/Q | rs727503638 | 0.144 | 0.003 | None | 0.136 | 0.149 | 0.216624796971 | gnomAD-4.0.0 | 6.84983E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16187E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1699 | likely_benign | 0.2174 | benign | -0.596 | Destabilizing | 0.09 | N | 0.339 | neutral | None | None | None | None | N |
E/C | 0.8865 | likely_pathogenic | 0.9276 | pathogenic | -0.315 | Destabilizing | 0.944 | D | 0.509 | neutral | None | None | None | None | N |
E/D | 0.304 | likely_benign | 0.3755 | ambiguous | -0.59 | Destabilizing | 0.324 | N | 0.374 | neutral | None | None | None | None | N |
E/F | 0.7555 | likely_pathogenic | 0.8568 | pathogenic | -0.128 | Destabilizing | 0.69 | D | 0.475 | neutral | None | None | None | None | N |
E/G | 0.3141 | likely_benign | 0.4101 | ambiguous | -0.862 | Destabilizing | 0.324 | N | 0.421 | neutral | None | None | None | None | N |
E/H | 0.545 | ambiguous | 0.6171 | pathogenic | 0.101 | Stabilizing | 0.818 | D | 0.365 | neutral | None | None | None | None | N |
E/I | 0.1744 | likely_benign | 0.3136 | benign | 0.099 | Stabilizing | 0.098 | N | 0.437 | neutral | None | None | None | None | N |
E/K | 0.1385 | likely_benign | 0.1673 | benign | 0.113 | Stabilizing | 0.09 | N | 0.392 | neutral | None | None | None | None | N |
E/L | 0.353 | ambiguous | 0.457 | ambiguous | 0.099 | Stabilizing | 0.241 | N | 0.405 | neutral | None | None | None | None | N |
E/M | 0.3273 | likely_benign | 0.4582 | ambiguous | 0.185 | Stabilizing | 0.69 | D | 0.445 | neutral | None | None | None | None | N |
E/N | 0.344 | ambiguous | 0.4374 | ambiguous | -0.512 | Destabilizing | 0.388 | N | 0.371 | neutral | None | None | None | None | N |
E/P | 0.9647 | likely_pathogenic | 0.9775 | pathogenic | -0.112 | Destabilizing | 0.818 | D | 0.383 | neutral | None | None | None | None | N |
E/Q | 0.1046 | likely_benign | 0.0799 | benign | -0.411 | Destabilizing | 0.003 | N | 0.136 | neutral | None | None | None | None | N |
E/R | 0.2312 | likely_benign | 0.2781 | benign | 0.452 | Stabilizing | 0.241 | N | 0.362 | neutral | None | None | None | None | N |
E/S | 0.2558 | likely_benign | 0.3315 | benign | -0.654 | Destabilizing | 0.388 | N | 0.337 | neutral | None | None | None | None | N |
E/T | 0.1884 | likely_benign | 0.2604 | benign | -0.423 | Destabilizing | 0.241 | N | 0.339 | neutral | None | None | None | None | N |
E/V | 0.1085 | likely_benign | 0.18 | benign | -0.112 | Destabilizing | 0.001 | N | 0.274 | neutral | None | None | None | None | N |
E/W | 0.925 | likely_pathogenic | 0.9567 | pathogenic | 0.147 | Stabilizing | 0.981 | D | 0.53 | neutral | None | None | None | None | N |
E/Y | 0.7351 | likely_pathogenic | 0.8181 | pathogenic | 0.143 | Stabilizing | 0.818 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.