Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 994 | 3205;3206;3207 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
N2AB | 994 | 3205;3206;3207 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
N2A | 994 | 3205;3206;3207 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
N2B | 948 | 3067;3068;3069 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
Novex-1 | 948 | 3067;3068;3069 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
Novex-2 | 948 | 3067;3068;3069 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
Novex-3 | 994 | 3205;3206;3207 | chr2:178782926;178782925;178782924 | chr2:179647653;179647652;179647651 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | None | N | 0.229 | 0.151 | 0.12205267543 | gnomAD-4.0.0 | 1.59054E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3418 | ambiguous | 0.3345 | benign | -0.206 | Destabilizing | 0.014 | N | 0.271 | neutral | None | None | None | None | I |
Q/C | 0.778 | likely_pathogenic | 0.7709 | pathogenic | -0.001 | Destabilizing | 0.864 | D | 0.184 | neutral | None | None | None | None | I |
Q/D | 0.4509 | ambiguous | 0.4271 | ambiguous | 0.388 | Stabilizing | 0.016 | N | 0.214 | neutral | None | None | None | None | I |
Q/E | 0.0959 | likely_benign | 0.0949 | benign | 0.376 | Stabilizing | None | N | 0.153 | neutral | N | 0.415581282 | None | None | I |
Q/F | 0.826 | likely_pathogenic | 0.8087 | pathogenic | -0.409 | Destabilizing | 0.214 | N | 0.256 | neutral | None | None | None | None | I |
Q/G | 0.4277 | ambiguous | 0.4261 | ambiguous | -0.383 | Destabilizing | 0.031 | N | 0.208 | neutral | None | None | None | None | I |
Q/H | 0.24 | likely_benign | 0.2316 | benign | -0.107 | Destabilizing | None | N | 0.199 | neutral | N | 0.507858615 | None | None | I |
Q/I | 0.5213 | ambiguous | 0.4824 | ambiguous | 0.171 | Stabilizing | 0.038 | N | 0.279 | neutral | None | None | None | None | I |
Q/K | 0.1116 | likely_benign | 0.1061 | benign | 0.172 | Stabilizing | None | N | 0.179 | neutral | N | 0.489412855 | None | None | I |
Q/L | 0.2311 | likely_benign | 0.2226 | benign | 0.171 | Stabilizing | 0.012 | N | 0.21 | neutral | N | 0.497926369 | None | None | I |
Q/M | 0.5451 | ambiguous | 0.522 | ambiguous | 0.194 | Stabilizing | 0.356 | N | 0.161 | neutral | None | None | None | None | I |
Q/N | 0.3823 | ambiguous | 0.3504 | ambiguous | -0.273 | Destabilizing | 0.016 | N | 0.141 | neutral | None | None | None | None | I |
Q/P | 0.5822 | likely_pathogenic | 0.5807 | pathogenic | 0.073 | Stabilizing | 0.106 | N | 0.243 | neutral | N | 0.501629175 | None | None | I |
Q/R | 0.1055 | likely_benign | 0.1084 | benign | 0.313 | Stabilizing | None | N | 0.229 | neutral | N | 0.493702042 | None | None | I |
Q/S | 0.3168 | likely_benign | 0.3026 | benign | -0.299 | Destabilizing | 0.016 | N | 0.175 | neutral | None | None | None | None | I |
Q/T | 0.27 | likely_benign | 0.2456 | benign | -0.15 | Destabilizing | None | N | 0.191 | neutral | None | None | None | None | I |
Q/V | 0.3586 | ambiguous | 0.3377 | benign | 0.073 | Stabilizing | 0.001 | N | 0.213 | neutral | None | None | None | None | I |
Q/W | 0.6963 | likely_pathogenic | 0.7013 | pathogenic | -0.396 | Destabilizing | 0.864 | D | 0.191 | neutral | None | None | None | None | I |
Q/Y | 0.6239 | likely_pathogenic | 0.6011 | pathogenic | -0.126 | Destabilizing | 0.038 | N | 0.279 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.