Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9942 | 30049;30050;30051 | chr2:178704648;178704647;178704646 | chr2:179569375;179569374;179569373 |
N2AB | 9625 | 29098;29099;29100 | chr2:178704648;178704647;178704646 | chr2:179569375;179569374;179569373 |
N2A | 8698 | 26317;26318;26319 | chr2:178704648;178704647;178704646 | chr2:179569375;179569374;179569373 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.002 | None | 0.131 | 0.051 | 0.144782658237 | gnomAD-4.0.0 | 1.59497E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4367E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.149 | likely_benign | 0.1799 | benign | -0.13 | Destabilizing | 0.016 | N | 0.124 | neutral | None | None | None | None | N |
E/C | 0.875 | likely_pathogenic | 0.8952 | pathogenic | -0.362 | Destabilizing | 0.992 | D | 0.401 | neutral | None | None | None | None | N |
E/D | 0.1295 | likely_benign | 0.133 | benign | -0.401 | Destabilizing | 0.002 | N | 0.131 | neutral | None | None | None | None | N |
E/F | 0.6661 | likely_pathogenic | 0.7218 | pathogenic | 0.161 | Stabilizing | 0.85 | D | 0.419 | neutral | None | None | None | None | N |
E/G | 0.2019 | likely_benign | 0.2614 | benign | -0.324 | Destabilizing | 0.002 | N | 0.166 | neutral | None | None | None | None | N |
E/H | 0.4659 | ambiguous | 0.5389 | ambiguous | 0.736 | Stabilizing | 0.972 | D | 0.385 | neutral | None | None | None | None | N |
E/I | 0.2791 | likely_benign | 0.3405 | ambiguous | 0.348 | Stabilizing | 0.447 | N | 0.424 | neutral | None | None | None | None | N |
E/K | 0.1728 | likely_benign | 0.2438 | benign | 0.363 | Stabilizing | 0.549 | D | 0.383 | neutral | None | None | None | None | N |
E/L | 0.2857 | likely_benign | 0.3341 | benign | 0.348 | Stabilizing | 0.447 | N | 0.448 | neutral | None | None | None | None | N |
E/M | 0.4002 | ambiguous | 0.46 | ambiguous | 0.076 | Stabilizing | 0.92 | D | 0.387 | neutral | None | None | None | None | N |
E/N | 0.2123 | likely_benign | 0.2586 | benign | -0.217 | Destabilizing | 0.447 | N | 0.383 | neutral | None | None | None | None | N |
E/P | 0.5811 | likely_pathogenic | 0.6283 | pathogenic | 0.209 | Stabilizing | 0.92 | D | 0.429 | neutral | None | None | None | None | N |
E/Q | 0.1398 | likely_benign | 0.1731 | benign | -0.129 | Destabilizing | 0.712 | D | 0.399 | neutral | None | None | None | None | N |
E/R | 0.31 | likely_benign | 0.3991 | ambiguous | 0.736 | Stabilizing | 0.92 | D | 0.393 | neutral | None | None | None | None | N |
E/S | 0.1756 | likely_benign | 0.2182 | benign | -0.32 | Destabilizing | 0.25 | N | 0.369 | neutral | None | None | None | None | N |
E/T | 0.202 | likely_benign | 0.2507 | benign | -0.14 | Destabilizing | 0.617 | D | 0.409 | neutral | None | None | None | None | N |
E/V | 0.1848 | likely_benign | 0.2191 | benign | 0.209 | Stabilizing | 0.004 | N | 0.245 | neutral | None | None | None | None | N |
E/W | 0.904 | likely_pathogenic | 0.9279 | pathogenic | 0.314 | Stabilizing | 0.992 | D | 0.462 | neutral | None | None | None | None | N |
E/Y | 0.5864 | likely_pathogenic | 0.6485 | pathogenic | 0.41 | Stabilizing | 0.92 | D | 0.411 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.