Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9945 | 30058;30059;30060 | chr2:178704639;178704638;178704637 | chr2:179569366;179569365;179569364 |
N2AB | 9628 | 29107;29108;29109 | chr2:178704639;178704638;178704637 | chr2:179569366;179569365;179569364 |
N2A | 8701 | 26326;26327;26328 | chr2:178704639;178704638;178704637 | chr2:179569366;179569365;179569364 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs763249086 | 0.068 | 0.062 | None | 0.347 | 0.109 | 0.152612264143 | gnomAD-2.1.1 | 8.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.3E-05 | None | 0 | 9.01E-06 | 0 |
D/G | rs763249086 | 0.068 | 0.062 | None | 0.347 | 0.109 | 0.152612264143 | gnomAD-4.0.0 | 2.05457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80015E-06 | 1.1622E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1611 | likely_benign | 0.2048 | benign | 0.101 | Stabilizing | 0.002 | N | 0.316 | neutral | None | None | None | None | N |
D/C | 0.6455 | likely_pathogenic | 0.7745 | pathogenic | -0.045 | Destabilizing | 0.935 | D | 0.437 | neutral | None | None | None | None | N |
D/E | 0.1289 | likely_benign | 0.1377 | benign | -0.299 | Destabilizing | 0.027 | N | 0.361 | neutral | None | None | None | None | N |
D/F | 0.7066 | likely_pathogenic | 0.8214 | pathogenic | -0.052 | Destabilizing | 0.791 | D | 0.399 | neutral | None | None | None | None | N |
D/G | 0.141 | likely_benign | 0.1949 | benign | 0.009 | Stabilizing | 0.062 | N | 0.347 | neutral | None | None | None | None | N |
D/H | 0.2451 | likely_benign | 0.342 | ambiguous | 0.514 | Stabilizing | 0.317 | N | 0.305 | neutral | None | None | None | None | N |
D/I | 0.4319 | ambiguous | 0.5793 | pathogenic | 0.272 | Stabilizing | 0.38 | N | 0.403 | neutral | None | None | None | None | N |
D/K | 0.222 | likely_benign | 0.3031 | benign | 0.497 | Stabilizing | 0.001 | N | 0.259 | neutral | None | None | None | None | N |
D/L | 0.41 | ambiguous | 0.5349 | ambiguous | 0.272 | Stabilizing | 0.38 | N | 0.397 | neutral | None | None | None | None | N |
D/M | 0.6425 | likely_pathogenic | 0.7578 | pathogenic | 0.099 | Stabilizing | 0.935 | D | 0.403 | neutral | None | None | None | None | N |
D/N | 0.0848 | likely_benign | 0.1033 | benign | 0.312 | Stabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
D/P | 0.4299 | ambiguous | 0.4892 | ambiguous | 0.234 | Stabilizing | 0.001 | N | 0.262 | neutral | None | None | None | None | N |
D/Q | 0.2559 | likely_benign | 0.3396 | benign | 0.306 | Stabilizing | 0.235 | N | 0.317 | neutral | None | None | None | None | N |
D/R | 0.2808 | likely_benign | 0.4063 | ambiguous | 0.655 | Stabilizing | 0.235 | N | 0.36 | neutral | None | None | None | None | N |
D/S | 0.0974 | likely_benign | 0.1239 | benign | 0.221 | Stabilizing | 0.081 | N | 0.345 | neutral | None | None | None | None | N |
D/T | 0.2418 | likely_benign | 0.3166 | benign | 0.3 | Stabilizing | 0.081 | N | 0.335 | neutral | None | None | None | None | N |
D/V | 0.2733 | likely_benign | 0.375 | ambiguous | 0.234 | Stabilizing | 0.317 | N | 0.391 | neutral | None | None | None | None | N |
D/W | 0.8821 | likely_pathogenic | 0.9362 | pathogenic | -0.047 | Destabilizing | 0.935 | D | 0.528 | neutral | None | None | None | None | N |
D/Y | 0.3316 | likely_benign | 0.4545 | ambiguous | 0.165 | Stabilizing | 0.741 | D | 0.398 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.