Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9946 | 30061;30062;30063 | chr2:178704636;178704635;178704634 | chr2:179569363;179569362;179569361 |
N2AB | 9629 | 29110;29111;29112 | chr2:178704636;178704635;178704634 | chr2:179569363;179569362;179569361 |
N2A | 8702 | 26329;26330;26331 | chr2:178704636;178704635;178704634 | chr2:179569363;179569362;179569361 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1181662412 | -0.464 | 0.993 | None | 0.686 | 0.287 | 0.119812018005 | gnomAD-2.1.1 | 8.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.126E-04 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1181662412 | -0.464 | 0.993 | None | 0.686 | 0.287 | 0.119812018005 | gnomAD-4.0.0 | 1.59444E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1268571982 | -0.684 | 0.993 | None | 0.684 | 0.414 | 0.330589388543 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8516 | likely_pathogenic | 0.9183 | pathogenic | -0.537 | Destabilizing | 0.983 | D | 0.499 | neutral | None | None | None | None | N |
K/C | 0.9463 | likely_pathogenic | 0.9685 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/D | 0.8887 | likely_pathogenic | 0.9435 | pathogenic | 0.044 | Stabilizing | 0.995 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/E | 0.7142 | likely_pathogenic | 0.8299 | pathogenic | 0.149 | Stabilizing | 0.955 | D | 0.398 | neutral | None | None | None | None | N |
K/F | 0.9742 | likely_pathogenic | 0.9866 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/G | 0.9169 | likely_pathogenic | 0.9604 | pathogenic | -0.889 | Destabilizing | 0.995 | D | 0.64 | neutral | None | None | None | None | N |
K/H | 0.6389 | likely_pathogenic | 0.7138 | pathogenic | -1.216 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/I | 0.7681 | likely_pathogenic | 0.8609 | pathogenic | 0.366 | Stabilizing | 0.997 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/L | 0.7868 | likely_pathogenic | 0.862 | pathogenic | 0.366 | Stabilizing | 0.995 | D | 0.64 | neutral | None | None | None | None | N |
K/M | 0.6944 | likely_pathogenic | 0.8004 | pathogenic | 0.236 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/N | 0.7959 | likely_pathogenic | 0.8819 | pathogenic | -0.293 | Destabilizing | 0.993 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/P | 0.9807 | likely_pathogenic | 0.9857 | pathogenic | 0.095 | Stabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/Q | 0.4926 | ambiguous | 0.6139 | pathogenic | -0.336 | Destabilizing | 0.568 | D | 0.249 | neutral | None | None | None | None | N |
K/R | 0.1462 | likely_benign | 0.1746 | benign | -0.486 | Destabilizing | 0.955 | D | 0.484 | neutral | None | None | None | None | N |
K/S | 0.8763 | likely_pathogenic | 0.9343 | pathogenic | -0.942 | Destabilizing | 0.983 | D | 0.514 | neutral | None | None | None | None | N |
K/T | 0.5363 | ambiguous | 0.6632 | pathogenic | -0.627 | Destabilizing | 0.993 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/V | 0.7713 | likely_pathogenic | 0.8574 | pathogenic | 0.095 | Stabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
K/W | 0.9739 | likely_pathogenic | 0.9858 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Y | 0.909 | likely_pathogenic | 0.9457 | pathogenic | 0.099 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.