Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9951 | 30076;30077;30078 | chr2:178704621;178704620;178704619 | chr2:179569348;179569347;179569346 |
N2AB | 9634 | 29125;29126;29127 | chr2:178704621;178704620;178704619 | chr2:179569348;179569347;179569346 |
N2A | 8707 | 26344;26345;26346 | chr2:178704621;178704620;178704619 | chr2:179569348;179569347;179569346 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1482211815 | 0.021 | 0.549 | None | 0.575 | 0.231 | 0.552900881131 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1482211815 | 0.021 | 0.549 | None | 0.575 | 0.231 | 0.552900881131 | gnomAD-4.0.0 | 1.59395E-06 | None | None | None | None | N | None | 0 | 2.29474E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | None | None | 0.002 | None | 0.243 | 0.052 | 0.320256813643 | gnomAD-4.0.0 | 3.42357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49975E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4205 | ambiguous | 0.5398 | ambiguous | -0.78 | Destabilizing | 0.021 | N | 0.335 | neutral | None | None | None | None | N |
I/C | 0.8641 | likely_pathogenic | 0.9199 | pathogenic | -0.581 | Destabilizing | 0.992 | D | 0.59 | neutral | None | None | None | None | N |
I/D | 0.9205 | likely_pathogenic | 0.9548 | pathogenic | -0.246 | Destabilizing | 0.85 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/E | 0.7174 | likely_pathogenic | 0.8127 | pathogenic | -0.341 | Destabilizing | 0.447 | N | 0.685 | prob.neutral | None | None | None | None | N |
I/F | 0.3817 | ambiguous | 0.4731 | ambiguous | -0.846 | Destabilizing | 0.009 | N | 0.3 | neutral | None | None | None | None | N |
I/G | 0.8739 | likely_pathogenic | 0.9252 | pathogenic | -0.958 | Destabilizing | 0.617 | D | 0.671 | neutral | None | None | None | None | N |
I/H | 0.7821 | likely_pathogenic | 0.8731 | pathogenic | -0.298 | Destabilizing | 0.977 | D | 0.675 | neutral | None | None | None | None | N |
I/K | 0.4579 | ambiguous | 0.6038 | pathogenic | -0.333 | Destabilizing | 0.447 | N | 0.687 | prob.neutral | None | None | None | None | N |
I/L | 0.1981 | likely_benign | 0.2553 | benign | -0.433 | Destabilizing | 0.099 | N | 0.315 | neutral | None | None | None | None | N |
I/M | 0.1471 | likely_benign | 0.1802 | benign | -0.33 | Destabilizing | 0.81 | D | 0.603 | neutral | None | None | None | None | N |
I/N | 0.6134 | likely_pathogenic | 0.7337 | pathogenic | -0.089 | Destabilizing | 0.896 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/P | 0.9522 | likely_pathogenic | 0.9665 | pathogenic | -0.515 | Destabilizing | 0.92 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/Q | 0.5875 | likely_pathogenic | 0.7162 | pathogenic | -0.346 | Destabilizing | 0.127 | N | 0.552 | neutral | None | None | None | None | N |
I/R | 0.3819 | ambiguous | 0.5244 | ambiguous | 0.235 | Stabilizing | 0.85 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/S | 0.5018 | ambiguous | 0.622 | pathogenic | -0.568 | Destabilizing | 0.379 | N | 0.646 | neutral | None | None | None | None | N |
I/T | 0.2046 | likely_benign | 0.2812 | benign | -0.551 | Destabilizing | 0.549 | D | 0.575 | neutral | None | None | None | None | N |
I/V | 0.0806 | likely_benign | 0.1011 | benign | -0.515 | Destabilizing | 0.002 | N | 0.243 | neutral | None | None | None | None | N |
I/W | 0.9285 | likely_pathogenic | 0.9484 | pathogenic | -0.851 | Destabilizing | 0.992 | D | 0.686 | prob.neutral | None | None | None | None | N |
I/Y | 0.817 | likely_pathogenic | 0.8732 | pathogenic | -0.583 | Destabilizing | 0.739 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.