Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9952 | 30079;30080;30081 | chr2:178704618;178704617;178704616 | chr2:179569345;179569344;179569343 |
N2AB | 9635 | 29128;29129;29130 | chr2:178704618;178704617;178704616 | chr2:179569345;179569344;179569343 |
N2A | 8708 | 26347;26348;26349 | chr2:178704618;178704617;178704616 | chr2:179569345;179569344;179569343 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs773555150 | 0.43 | 0.602 | None | 0.263 | 0.126 | None | gnomAD-2.1.1 | 8.12E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
D/H | rs773555150 | 0.43 | 0.602 | None | 0.263 | 0.126 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78469E-04 |
D/H | rs773555150 | 0.43 | 0.602 | None | 0.263 | 0.126 | None | gnomAD-4.0.0 | 9.92195E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18728E-05 | 0 | 3.2042E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1084 | likely_benign | 0.1354 | benign | -0.081 | Destabilizing | 0.019 | N | 0.2 | neutral | None | None | None | None | I |
D/C | 0.4857 | ambiguous | 0.6049 | pathogenic | 0.076 | Stabilizing | 0.667 | D | 0.32 | neutral | None | None | None | None | I |
D/E | 0.1133 | likely_benign | 0.1435 | benign | -0.312 | Destabilizing | None | N | 0.063 | neutral | None | None | None | None | I |
D/F | 0.4347 | ambiguous | 0.5249 | ambiguous | -0.141 | Destabilizing | 0.497 | N | 0.415 | neutral | None | None | None | None | I |
D/G | 0.2244 | likely_benign | 0.2409 | benign | -0.218 | Destabilizing | 0.042 | N | 0.264 | neutral | None | None | None | None | I |
D/H | 0.1377 | likely_benign | 0.1795 | benign | 0.233 | Stabilizing | 0.602 | D | 0.263 | neutral | None | None | None | None | I |
D/I | 0.1845 | likely_benign | 0.2482 | benign | 0.217 | Stabilizing | 0.004 | N | 0.213 | neutral | None | None | None | None | I |
D/K | 0.1778 | likely_benign | 0.2528 | benign | 0.571 | Stabilizing | 0.055 | N | 0.272 | neutral | None | None | None | None | I |
D/L | 0.2583 | likely_benign | 0.3307 | benign | 0.217 | Stabilizing | 0.055 | N | 0.281 | neutral | None | None | None | None | I |
D/M | 0.4471 | ambiguous | 0.575 | pathogenic | 0.199 | Stabilizing | 0.497 | N | 0.349 | neutral | None | None | None | None | I |
D/N | 0.0785 | likely_benign | 0.0935 | benign | 0.258 | Stabilizing | 0.001 | N | 0.101 | neutral | None | None | None | None | I |
D/P | 0.9336 | likely_pathogenic | 0.9338 | pathogenic | 0.138 | Stabilizing | 0.364 | N | 0.326 | neutral | None | None | None | None | I |
D/Q | 0.1777 | likely_benign | 0.2423 | benign | 0.265 | Stabilizing | 0.004 | N | 0.129 | neutral | None | None | None | None | I |
D/R | 0.2092 | likely_benign | 0.2652 | benign | 0.696 | Stabilizing | 0.124 | N | 0.381 | neutral | None | None | None | None | I |
D/S | 0.0843 | likely_benign | 0.1018 | benign | 0.203 | Stabilizing | 0.005 | N | 0.067 | neutral | None | None | None | None | I |
D/T | 0.1371 | likely_benign | 0.1849 | benign | 0.315 | Stabilizing | 0.055 | N | 0.256 | neutral | None | None | None | None | I |
D/V | 0.1181 | likely_benign | 0.1459 | benign | 0.138 | Stabilizing | None | N | 0.135 | neutral | None | None | None | None | I |
D/W | 0.8002 | likely_pathogenic | 0.8529 | pathogenic | -0.067 | Destabilizing | 0.958 | D | 0.326 | neutral | None | None | None | None | I |
D/Y | 0.1793 | likely_benign | 0.2137 | benign | 0.093 | Stabilizing | 0.602 | D | 0.403 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.