Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9962 | 30109;30110;30111 | chr2:178704588;178704587;178704586 | chr2:179569315;179569314;179569313 |
N2AB | 9645 | 29158;29159;29160 | chr2:178704588;178704587;178704586 | chr2:179569315;179569314;179569313 |
N2A | 8718 | 26377;26378;26379 | chr2:178704588;178704587;178704586 | chr2:179569315;179569314;179569313 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.002 | None | 0.1 | 0.128 | 0.162503812791 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5593 | ambiguous | 0.6643 | pathogenic | -0.264 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
N/C | 0.75 | likely_pathogenic | 0.8014 | pathogenic | 0.439 | Stabilizing | 0.864 | D | 0.419 | neutral | None | None | None | None | N |
N/D | 0.1646 | likely_benign | 0.1862 | benign | -0.918 | Destabilizing | None | N | 0.073 | neutral | None | None | None | None | N |
N/E | 0.5643 | likely_pathogenic | 0.6652 | pathogenic | -0.909 | Destabilizing | 0.016 | N | 0.257 | neutral | None | None | None | None | N |
N/F | 0.8424 | likely_pathogenic | 0.8844 | pathogenic | -0.5 | Destabilizing | 0.12 | N | 0.49 | neutral | None | None | None | None | N |
N/G | 0.4964 | ambiguous | 0.5781 | pathogenic | -0.505 | Destabilizing | 0.031 | N | 0.246 | neutral | None | None | None | None | N |
N/H | 0.2045 | likely_benign | 0.2214 | benign | -0.613 | Destabilizing | 0.171 | N | 0.301 | neutral | None | None | None | None | N |
N/I | 0.7969 | likely_pathogenic | 0.8767 | pathogenic | 0.301 | Stabilizing | 0.171 | N | 0.495 | neutral | None | None | None | None | N |
N/K | 0.4217 | ambiguous | 0.5176 | ambiguous | -0.043 | Destabilizing | 0.001 | N | 0.102 | neutral | None | None | None | None | N |
N/L | 0.7347 | likely_pathogenic | 0.815 | pathogenic | 0.301 | Stabilizing | 0.072 | N | 0.427 | neutral | None | None | None | None | N |
N/M | 0.7484 | likely_pathogenic | 0.8252 | pathogenic | 0.965 | Stabilizing | 0.628 | D | 0.409 | neutral | None | None | None | None | N |
N/P | 0.979 | likely_pathogenic | 0.9863 | pathogenic | 0.142 | Stabilizing | 0.356 | N | 0.477 | neutral | None | None | None | None | N |
N/Q | 0.5034 | ambiguous | 0.574 | pathogenic | -0.751 | Destabilizing | 0.072 | N | 0.267 | neutral | None | None | None | None | N |
N/R | 0.5047 | ambiguous | 0.5948 | pathogenic | 0.088 | Stabilizing | None | N | 0.215 | neutral | None | None | None | None | N |
N/S | 0.2175 | likely_benign | 0.2619 | benign | -0.372 | Destabilizing | 0.002 | N | 0.1 | neutral | None | None | None | None | N |
N/T | 0.4807 | ambiguous | 0.5848 | pathogenic | -0.222 | Destabilizing | 0.024 | N | 0.178 | neutral | None | None | None | None | N |
N/V | 0.7793 | likely_pathogenic | 0.8584 | pathogenic | 0.142 | Stabilizing | 0.072 | N | 0.476 | neutral | None | None | None | None | N |
N/W | 0.9435 | likely_pathogenic | 0.9608 | pathogenic | -0.452 | Destabilizing | 0.676 | D | 0.423 | neutral | None | None | None | None | N |
N/Y | 0.342 | ambiguous | 0.4024 | ambiguous | -0.154 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.