Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9965 | 30118;30119;30120 | chr2:178704579;178704578;178704577 | chr2:179569306;179569305;179569304 |
N2AB | 9648 | 29167;29168;29169 | chr2:178704579;178704578;178704577 | chr2:179569306;179569305;179569304 |
N2A | 8721 | 26386;26387;26388 | chr2:178704579;178704578;178704577 | chr2:179569306;179569305;179569304 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.56 | None | 0.227 | 0.115 | 0.38225645794 | gnomAD-4.0.0 | 8.40227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18753E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1685 | likely_benign | 0.2091 | benign | -1.081 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | N |
L/C | 0.6463 | likely_pathogenic | 0.7159 | pathogenic | -0.582 | Destabilizing | 0.864 | D | 0.227 | neutral | None | None | None | None | N |
L/D | 0.5196 | ambiguous | 0.6005 | pathogenic | -0.698 | Destabilizing | 0.072 | N | 0.351 | neutral | None | None | None | None | N |
L/E | 0.2178 | likely_benign | 0.2562 | benign | -0.773 | Destabilizing | 0.072 | N | 0.339 | neutral | None | None | None | None | N |
L/F | 0.2063 | likely_benign | 0.2197 | benign | -0.925 | Destabilizing | 0.56 | D | 0.227 | neutral | None | None | None | None | N |
L/G | 0.4423 | ambiguous | 0.5091 | ambiguous | -1.303 | Destabilizing | 0.072 | N | 0.323 | neutral | None | None | None | None | N |
L/H | 0.2364 | likely_benign | 0.2702 | benign | -0.56 | Destabilizing | 0.828 | D | 0.275 | neutral | None | None | None | None | N |
L/I | 0.1037 | likely_benign | 0.1055 | benign | -0.591 | Destabilizing | 0.055 | N | 0.215 | neutral | None | None | None | None | N |
L/K | 0.1823 | likely_benign | 0.2112 | benign | -0.721 | Destabilizing | 0.072 | N | 0.307 | neutral | None | None | None | None | N |
L/M | 0.135 | likely_benign | 0.1455 | benign | -0.437 | Destabilizing | 0.628 | D | 0.26 | neutral | None | None | None | None | N |
L/N | 0.3149 | likely_benign | 0.3723 | ambiguous | -0.399 | Destabilizing | 0.072 | N | 0.363 | neutral | None | None | None | None | N |
L/P | 0.0941 | likely_benign | 0.1149 | benign | -0.722 | Destabilizing | None | N | 0.19 | neutral | None | None | None | None | N |
L/Q | 0.1194 | likely_benign | 0.1358 | benign | -0.662 | Destabilizing | 0.356 | N | 0.321 | neutral | None | None | None | None | N |
L/R | 0.1659 | likely_benign | 0.1875 | benign | -0.069 | Destabilizing | 0.295 | N | 0.327 | neutral | None | None | None | None | N |
L/S | 0.2189 | likely_benign | 0.258 | benign | -0.864 | Destabilizing | 0.003 | N | 0.183 | neutral | None | None | None | None | N |
L/T | 0.1761 | likely_benign | 0.2 | benign | -0.835 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
L/V | 0.1063 | likely_benign | 0.1103 | benign | -0.722 | Destabilizing | 0.024 | N | 0.245 | neutral | None | None | None | None | N |
L/W | 0.3224 | likely_benign | 0.3529 | ambiguous | -0.938 | Destabilizing | 0.864 | D | 0.304 | neutral | None | None | None | None | N |
L/Y | 0.3881 | ambiguous | 0.4461 | ambiguous | -0.725 | Destabilizing | 0.628 | D | 0.238 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.