Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9970 | 30133;30134;30135 | chr2:178704564;178704563;178704562 | chr2:179569291;179569290;179569289 |
N2AB | 9653 | 29182;29183;29184 | chr2:178704564;178704563;178704562 | chr2:179569291;179569290;179569289 |
N2A | 8726 | 26401;26402;26403 | chr2:178704564;178704563;178704562 | chr2:179569291;179569290;179569289 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2075551861 | None | 0.984 | None | 0.543 | 0.209 | 0.352476196916 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
N/S | rs2075551861 | None | 0.984 | None | 0.543 | 0.209 | 0.352476196916 | gnomAD-4.0.0 | 2.5628E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.24014E-04 | 0 | 1.34228E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7349 | likely_pathogenic | 0.7165 | pathogenic | -0.972 | Destabilizing | 0.988 | D | 0.64 | neutral | None | None | None | None | N |
N/C | 0.7797 | likely_pathogenic | 0.8014 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
N/D | 0.7506 | likely_pathogenic | 0.6549 | pathogenic | -0.117 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | N |
N/E | 0.9436 | likely_pathogenic | 0.9184 | pathogenic | -0.068 | Destabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
N/F | 0.8769 | likely_pathogenic | 0.8737 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
N/G | 0.7944 | likely_pathogenic | 0.7841 | pathogenic | -1.258 | Destabilizing | 0.994 | D | 0.543 | neutral | None | None | None | None | N |
N/H | 0.5078 | ambiguous | 0.4442 | ambiguous | -0.991 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/I | 0.5761 | likely_pathogenic | 0.5547 | ambiguous | -0.265 | Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
N/K | 0.9433 | likely_pathogenic | 0.9154 | pathogenic | -0.125 | Destabilizing | 0.992 | D | 0.595 | neutral | None | None | None | None | N |
N/L | 0.6418 | likely_pathogenic | 0.6321 | pathogenic | -0.265 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
N/M | 0.76 | likely_pathogenic | 0.7525 | pathogenic | 0.268 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
N/P | 0.8781 | likely_pathogenic | 0.8832 | pathogenic | -0.473 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
N/Q | 0.8892 | likely_pathogenic | 0.8661 | pathogenic | -0.718 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
N/R | 0.9262 | likely_pathogenic | 0.9001 | pathogenic | -0.059 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
N/S | 0.2106 | likely_benign | 0.1988 | benign | -0.698 | Destabilizing | 0.984 | D | 0.543 | neutral | None | None | None | None | N |
N/T | 0.4495 | ambiguous | 0.4213 | ambiguous | -0.458 | Destabilizing | 0.619 | D | 0.309 | neutral | None | None | None | None | N |
N/V | 0.6097 | likely_pathogenic | 0.6131 | pathogenic | -0.473 | Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
N/W | 0.9688 | likely_pathogenic | 0.9675 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
N/Y | 0.5586 | ambiguous | 0.5258 | ambiguous | -0.47 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.