Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9971 | 30136;30137;30138 | chr2:178704561;178704560;178704559 | chr2:179569288;179569287;179569286 |
N2AB | 9654 | 29185;29186;29187 | chr2:178704561;178704560;178704559 | chr2:179569288;179569287;179569286 |
N2A | 8727 | 26404;26405;26406 | chr2:178704561;178704560;178704559 | chr2:179569288;179569287;179569286 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.008 | None | 0.451 | 0.454 | 0.48087575253 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 0 |
Y/H | rs1471839553 | -2.225 | 0.983 | None | 0.734 | 0.81 | 0.636259158049 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -2.018 | Highly Destabilizing | 0.633 | D | 0.823 | deleterious | None | None | None | None | N |
Y/C | 0.9589 | likely_pathogenic | 0.9632 | pathogenic | -1.467 | Destabilizing | 0.995 | D | 0.889 | deleterious | None | None | None | None | N |
Y/D | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -2.877 | Highly Destabilizing | 0.901 | D | 0.903 | deleterious | None | None | None | None | N |
Y/E | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.63 | Highly Destabilizing | 0.923 | D | 0.857 | deleterious | None | None | None | None | N |
Y/F | 0.1347 | likely_benign | 0.1877 | benign | -0.664 | Destabilizing | 0.008 | N | 0.451 | neutral | None | None | None | None | N |
Y/G | 0.997 | likely_pathogenic | 0.9971 | pathogenic | -2.462 | Highly Destabilizing | 0.775 | D | 0.863 | deleterious | None | None | None | None | N |
Y/H | 0.9858 | likely_pathogenic | 0.9876 | pathogenic | -1.981 | Destabilizing | 0.983 | D | 0.734 | prob.delet. | None | None | None | None | N |
Y/I | 0.9276 | likely_pathogenic | 0.9391 | pathogenic | -0.55 | Destabilizing | 0.858 | D | 0.815 | deleterious | None | None | None | None | N |
Y/K | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -1.861 | Destabilizing | 0.923 | D | 0.86 | deleterious | None | None | None | None | N |
Y/L | 0.9182 | likely_pathogenic | 0.916 | pathogenic | -0.55 | Destabilizing | 0.633 | D | 0.773 | deleterious | None | None | None | None | N |
Y/M | 0.9853 | likely_pathogenic | 0.9874 | pathogenic | -0.656 | Destabilizing | 0.989 | D | 0.825 | deleterious | None | None | None | None | N |
Y/N | 0.9946 | likely_pathogenic | 0.9946 | pathogenic | -2.828 | Highly Destabilizing | 0.901 | D | 0.89 | deleterious | None | None | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -1.054 | Destabilizing | 0.961 | D | 0.907 | deleterious | None | None | None | None | N |
Y/Q | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -2.329 | Highly Destabilizing | 0.961 | D | 0.819 | deleterious | None | None | None | None | N |
Y/R | 0.9968 | likely_pathogenic | 0.9975 | pathogenic | -2.249 | Highly Destabilizing | 0.961 | D | 0.893 | deleterious | None | None | None | None | N |
Y/S | 0.9962 | likely_pathogenic | 0.9961 | pathogenic | -3.071 | Highly Destabilizing | 0.075 | N | 0.685 | prob.neutral | None | None | None | None | N |
Y/T | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -2.674 | Highly Destabilizing | 0.858 | D | 0.842 | deleterious | None | None | None | None | N |
Y/V | 0.928 | likely_pathogenic | 0.9322 | pathogenic | -1.054 | Destabilizing | 0.633 | D | 0.8 | deleterious | None | None | None | None | N |
Y/W | 0.8473 | likely_pathogenic | 0.8767 | pathogenic | -0.117 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.