Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9977 | 30154;30155;30156 | chr2:178704543;178704542;178704541 | chr2:179569270;179569269;179569268 |
N2AB | 9660 | 29203;29204;29205 | chr2:178704543;178704542;178704541 | chr2:179569270;179569269;179569268 |
N2A | 8733 | 26422;26423;26424 | chr2:178704543;178704542;178704541 | chr2:179569270;179569269;179569268 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1254687485 | None | 1.0 | None | 0.686 | 0.329 | 0.206339911435 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1254687485 | None | 1.0 | None | 0.686 | 0.329 | 0.206339911435 | gnomAD-4.0.0 | 3.84925E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19031E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9397 | likely_pathogenic | 0.8224 | pathogenic | -0.448 | Destabilizing | 0.992 | D | 0.613 | neutral | None | None | None | None | I |
P/C | 0.9978 | likely_pathogenic | 0.9926 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
P/D | 0.9941 | likely_pathogenic | 0.9806 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
P/E | 0.9894 | likely_pathogenic | 0.9631 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/F | 0.9975 | likely_pathogenic | 0.9935 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/G | 0.9889 | likely_pathogenic | 0.9685 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
P/H | 0.9842 | likely_pathogenic | 0.9483 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/I | 0.992 | likely_pathogenic | 0.9767 | pathogenic | -0.237 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | I |
P/K | 0.9901 | likely_pathogenic | 0.9702 | pathogenic | -0.506 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/L | 0.9656 | likely_pathogenic | 0.9029 | pathogenic | -0.237 | Destabilizing | 0.467 | N | 0.505 | neutral | None | None | None | None | I |
P/M | 0.9927 | likely_pathogenic | 0.9782 | pathogenic | -0.537 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/N | 0.9912 | likely_pathogenic | 0.9741 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/Q | 0.9823 | likely_pathogenic | 0.9413 | pathogenic | -0.521 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
P/R | 0.9756 | likely_pathogenic | 0.9262 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/S | 0.9721 | likely_pathogenic | 0.9062 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
P/T | 0.9676 | likely_pathogenic | 0.8933 | pathogenic | -0.625 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
P/V | 0.9861 | likely_pathogenic | 0.9586 | pathogenic | -0.276 | Destabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | I |
P/W | 0.9985 | likely_pathogenic | 0.9955 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
P/Y | 0.9964 | likely_pathogenic | 0.9889 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.