Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9979 | 30160;30161;30162 | chr2:178704537;178704536;178704535 | chr2:179569264;179569263;179569262 |
N2AB | 9662 | 29209;29210;29211 | chr2:178704537;178704536;178704535 | chr2:179569264;179569263;179569262 |
N2A | 8735 | 26428;26429;26430 | chr2:178704537;178704536;178704535 | chr2:179569264;179569263;179569262 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs879217763 | -0.188 | 0.993 | None | 0.267 | 0.225 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/V | rs879217763 | -0.188 | 0.993 | None | 0.267 | 0.225 | None | gnomAD-4.0.0 | 3.19222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73388E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9775 | likely_pathogenic | 0.9537 | pathogenic | -1.109 | Destabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | N |
I/C | 0.9981 | likely_pathogenic | 0.9951 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/D | 0.9987 | likely_pathogenic | 0.9966 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
I/E | 0.9918 | likely_pathogenic | 0.9821 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
I/F | 0.902 | likely_pathogenic | 0.8131 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
I/G | 0.9975 | likely_pathogenic | 0.9942 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/H | 0.9956 | likely_pathogenic | 0.9885 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/K | 0.9824 | likely_pathogenic | 0.9632 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
I/L | 0.7531 | likely_pathogenic | 0.6314 | pathogenic | -0.569 | Destabilizing | 0.993 | D | 0.277 | neutral | None | None | None | None | N |
I/M | 0.6922 | likely_pathogenic | 0.5401 | ambiguous | -0.41 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/N | 0.9856 | likely_pathogenic | 0.965 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/P | 0.9971 | likely_pathogenic | 0.9941 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
I/Q | 0.9885 | likely_pathogenic | 0.9743 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/R | 0.9742 | likely_pathogenic | 0.9428 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
I/S | 0.9771 | likely_pathogenic | 0.9501 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
I/T | 0.9459 | likely_pathogenic | 0.882 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
I/V | 0.4748 | ambiguous | 0.3748 | ambiguous | -0.716 | Destabilizing | 0.993 | D | 0.267 | neutral | None | None | None | None | N |
I/W | 0.9956 | likely_pathogenic | 0.9909 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/Y | 0.9841 | likely_pathogenic | 0.9706 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.