Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9981 | 30166;30167;30168 | chr2:178704531;178704530;178704529 | chr2:179569258;179569257;179569256 |
N2AB | 9664 | 29215;29216;29217 | chr2:178704531;178704530;178704529 | chr2:179569258;179569257;179569256 |
N2A | 8737 | 26434;26435;26436 | chr2:178704531;178704530;178704529 | chr2:179569258;179569257;179569256 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.939 | None | 0.545 | 0.282 | 0.149567049428 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
S/T | None | None | 0.969 | None | 0.479 | 0.263 | 0.134241683229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3172 | likely_benign | 0.2708 | benign | -0.506 | Destabilizing | 0.807 | D | 0.367 | neutral | None | None | None | None | N |
S/C | 0.6758 | likely_pathogenic | 0.6399 | pathogenic | -0.357 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
S/D | 0.968 | likely_pathogenic | 0.9498 | pathogenic | -0.081 | Destabilizing | 0.976 | D | 0.531 | neutral | None | None | None | None | N |
S/E | 0.9733 | likely_pathogenic | 0.9519 | pathogenic | -0.146 | Destabilizing | 0.976 | D | 0.537 | neutral | None | None | None | None | N |
S/F | 0.9214 | likely_pathogenic | 0.8513 | pathogenic | -0.896 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/G | 0.4574 | ambiguous | 0.3926 | ambiguous | -0.678 | Destabilizing | 0.02 | N | 0.219 | neutral | None | None | None | None | N |
S/H | 0.9193 | likely_pathogenic | 0.8824 | pathogenic | -1.193 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
S/I | 0.8444 | likely_pathogenic | 0.7783 | pathogenic | -0.171 | Destabilizing | 0.997 | D | 0.686 | prob.neutral | None | None | None | None | N |
S/K | 0.9928 | likely_pathogenic | 0.9862 | pathogenic | -0.645 | Destabilizing | 0.976 | D | 0.55 | neutral | None | None | None | None | N |
S/L | 0.7433 | likely_pathogenic | 0.6135 | pathogenic | -0.171 | Destabilizing | 0.993 | D | 0.655 | neutral | None | None | None | None | N |
S/M | 0.7805 | likely_pathogenic | 0.7106 | pathogenic | 0.12 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
S/N | 0.6179 | likely_pathogenic | 0.5887 | pathogenic | -0.407 | Destabilizing | 0.939 | D | 0.545 | neutral | None | None | None | None | N |
S/P | 0.9802 | likely_pathogenic | 0.9674 | pathogenic | -0.251 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
S/Q | 0.947 | likely_pathogenic | 0.9222 | pathogenic | -0.662 | Destabilizing | 0.998 | D | 0.626 | neutral | None | None | None | None | N |
S/R | 0.9856 | likely_pathogenic | 0.9715 | pathogenic | -0.43 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/T | 0.3818 | ambiguous | 0.31 | benign | -0.488 | Destabilizing | 0.969 | D | 0.479 | neutral | None | None | None | None | N |
S/V | 0.8032 | likely_pathogenic | 0.7431 | pathogenic | -0.251 | Destabilizing | 0.993 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/W | 0.939 | likely_pathogenic | 0.902 | pathogenic | -0.864 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/Y | 0.8682 | likely_pathogenic | 0.7952 | pathogenic | -0.609 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.