Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9985 | 30178;30179;30180 | chr2:178704519;178704518;178704517 | chr2:179569246;179569245;179569244 |
N2AB | 9668 | 29227;29228;29229 | chr2:178704519;178704518;178704517 | chr2:179569246;179569245;179569244 |
N2A | 8741 | 26446;26447;26448 | chr2:178704519;178704518;178704517 | chr2:179569246;179569245;179569244 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1339300021 | None | 0.379 | None | 0.514 | 0.328 | 0.326074293725 | gnomAD-4.0.0 | 4.82177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.75377E-04 | 3.61473E-06 | 0 | 3.33901E-05 |
T/S | None | None | 0.016 | None | 0.345 | 0.067 | 0.104622674875 | gnomAD-4.0.0 | 6.88825E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03684E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2503 | likely_benign | 0.2343 | benign | -0.872 | Destabilizing | 0.004 | N | 0.32 | neutral | None | None | None | None | N |
T/C | 0.858 | likely_pathogenic | 0.8575 | pathogenic | -0.655 | Destabilizing | 0.977 | D | 0.51 | neutral | None | None | None | None | N |
T/D | 0.7816 | likely_pathogenic | 0.7398 | pathogenic | -0.371 | Destabilizing | 0.447 | N | 0.508 | neutral | None | None | None | None | N |
T/E | 0.6252 | likely_pathogenic | 0.591 | pathogenic | -0.338 | Destabilizing | 0.021 | N | 0.317 | neutral | None | None | None | None | N |
T/F | 0.5829 | likely_pathogenic | 0.5418 | ambiguous | -0.776 | Destabilizing | 0.92 | D | 0.579 | neutral | None | None | None | None | N |
T/G | 0.7722 | likely_pathogenic | 0.7649 | pathogenic | -1.163 | Destabilizing | 0.447 | N | 0.503 | neutral | None | None | None | None | N |
T/H | 0.5442 | ambiguous | 0.4986 | ambiguous | -1.38 | Destabilizing | 0.992 | D | 0.583 | neutral | None | None | None | None | N |
T/I | 0.3541 | ambiguous | 0.327 | benign | -0.175 | Destabilizing | 0.379 | N | 0.514 | neutral | None | None | None | None | N |
T/K | 0.5253 | ambiguous | 0.489 | ambiguous | -0.782 | Destabilizing | 0.617 | D | 0.509 | neutral | None | None | None | None | N |
T/L | 0.2424 | likely_benign | 0.233 | benign | -0.175 | Destabilizing | 0.447 | N | 0.427 | neutral | None | None | None | None | N |
T/M | 0.1612 | likely_benign | 0.1529 | benign | 0.009 | Stabilizing | 0.92 | D | 0.505 | neutral | None | None | None | None | N |
T/N | 0.3336 | likely_benign | 0.2897 | benign | -0.815 | Destabilizing | 0.81 | D | 0.459 | neutral | None | None | None | None | N |
T/P | 0.8921 | likely_pathogenic | 0.8937 | pathogenic | -0.374 | Destabilizing | 0.896 | D | 0.52 | neutral | None | None | None | None | N |
T/Q | 0.4896 | ambiguous | 0.4528 | ambiguous | -0.941 | Destabilizing | 0.85 | D | 0.525 | neutral | None | None | None | None | N |
T/R | 0.4589 | ambiguous | 0.4184 | ambiguous | -0.588 | Destabilizing | 0.85 | D | 0.527 | neutral | None | None | None | None | N |
T/S | 0.3232 | likely_benign | 0.2876 | benign | -1.115 | Destabilizing | 0.016 | N | 0.345 | neutral | None | None | None | None | N |
T/V | 0.2756 | likely_benign | 0.2698 | benign | -0.374 | Destabilizing | 0.021 | N | 0.317 | neutral | None | None | None | None | N |
T/W | 0.8831 | likely_pathogenic | 0.8694 | pathogenic | -0.706 | Destabilizing | 0.992 | D | 0.629 | neutral | None | None | None | None | N |
T/Y | 0.6553 | likely_pathogenic | 0.6344 | pathogenic | -0.472 | Destabilizing | 0.972 | D | 0.584 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.