Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9989 | 30190;30191;30192 | chr2:178704405;178704404;178704403 | chr2:179569132;179569131;179569130 |
N2AB | 9672 | 29239;29240;29241 | chr2:178704405;178704404;178704403 | chr2:179569132;179569131;179569130 |
N2A | 8745 | 26458;26459;26460 | chr2:178704405;178704404;178704403 | chr2:179569132;179569131;179569130 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1553877891 | None | 0.98 | None | 0.525 | 0.646 | 0.780941640523 | gnomAD-4.0.0 | 8.21707E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51991E-05 | None | 0 | 1.7343E-04 | 9.00135E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.252 | likely_benign | 0.2929 | benign | -0.604 | Destabilizing | 0.961 | D | 0.513 | neutral | None | None | None | None | N |
P/C | 0.9656 | likely_pathogenic | 0.9726 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
P/D | 0.9505 | likely_pathogenic | 0.9429 | pathogenic | -0.429 | Destabilizing | 0.996 | D | 0.539 | neutral | None | None | None | None | N |
P/E | 0.8572 | likely_pathogenic | 0.8499 | pathogenic | -0.478 | Destabilizing | 0.97 | D | 0.524 | neutral | None | None | None | None | N |
P/F | 0.9732 | likely_pathogenic | 0.9775 | pathogenic | -0.665 | Destabilizing | 0.991 | D | 0.609 | neutral | None | None | None | None | N |
P/G | 0.8448 | likely_pathogenic | 0.8568 | pathogenic | -0.742 | Destabilizing | 0.985 | D | 0.507 | neutral | None | None | None | None | N |
P/H | 0.8316 | likely_pathogenic | 0.8365 | pathogenic | -0.055 | Destabilizing | 0.151 | N | 0.407 | neutral | None | None | None | None | N |
P/I | 0.8813 | likely_pathogenic | 0.8963 | pathogenic | -0.347 | Destabilizing | 0.983 | D | 0.571 | neutral | None | None | None | None | N |
P/K | 0.8684 | likely_pathogenic | 0.8627 | pathogenic | -0.542 | Destabilizing | 0.991 | D | 0.527 | neutral | None | None | None | None | N |
P/L | 0.5445 | ambiguous | 0.5681 | pathogenic | -0.347 | Destabilizing | 0.071 | N | 0.427 | neutral | None | None | None | None | N |
P/M | 0.8819 | likely_pathogenic | 0.8928 | pathogenic | -0.776 | Destabilizing | 0.991 | D | 0.591 | neutral | None | None | None | None | N |
P/N | 0.922 | likely_pathogenic | 0.9216 | pathogenic | -0.524 | Destabilizing | 0.991 | D | 0.564 | neutral | None | None | None | None | N |
P/Q | 0.7816 | likely_pathogenic | 0.7912 | pathogenic | -0.637 | Destabilizing | 0.996 | D | 0.572 | neutral | None | None | None | None | N |
P/R | 0.756 | likely_pathogenic | 0.7614 | pathogenic | -0.123 | Destabilizing | 0.989 | D | 0.569 | neutral | None | None | None | None | N |
P/S | 0.65 | likely_pathogenic | 0.6717 | pathogenic | -0.885 | Destabilizing | 0.961 | D | 0.514 | neutral | None | None | None | None | N |
P/T | 0.5462 | ambiguous | 0.5714 | pathogenic | -0.825 | Destabilizing | 0.98 | D | 0.525 | neutral | None | None | None | None | N |
P/V | 0.7297 | likely_pathogenic | 0.764 | pathogenic | -0.405 | Destabilizing | 0.942 | D | 0.524 | neutral | None | None | None | None | N |
P/W | 0.9859 | likely_pathogenic | 0.9876 | pathogenic | -0.727 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
P/Y | 0.9532 | likely_pathogenic | 0.9594 | pathogenic | -0.467 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.