Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9990 | 30193;30194;30195 | chr2:178704402;178704401;178704400 | chr2:179569129;179569128;179569127 |
N2AB | 9673 | 29242;29243;29244 | chr2:178704402;178704401;178704400 | chr2:179569129;179569128;179569127 |
N2A | 8746 | 26461;26462;26463 | chr2:178704402;178704401;178704400 | chr2:179569129;179569128;179569127 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1447594243 | 0.81 | 0.001 | None | 0.149 | 0.086 | 0.144782658237 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs1447594243 | 0.81 | 0.001 | None | 0.149 | 0.086 | 0.144782658237 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs1447594243 | 0.81 | 0.001 | None | 0.149 | 0.086 | 0.144782658237 | gnomAD-4.0.0 | 6.56909E-06 | None | None | None | None | N | None | 2.41208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6853 | likely_pathogenic | 0.728 | pathogenic | -0.715 | Destabilizing | 0.944 | D | 0.435 | neutral | None | None | None | None | N |
A/D | 0.4501 | ambiguous | 0.4899 | ambiguous | -0.752 | Destabilizing | 0.388 | N | 0.424 | neutral | None | None | None | None | N |
A/E | 0.2807 | likely_benign | 0.3131 | benign | -0.729 | Destabilizing | 0.324 | N | 0.386 | neutral | None | None | None | None | N |
A/F | 0.449 | ambiguous | 0.5039 | ambiguous | -0.761 | Destabilizing | 0.69 | D | 0.458 | neutral | None | None | None | None | N |
A/G | 0.2269 | likely_benign | 0.2555 | benign | -0.981 | Destabilizing | 0.165 | N | 0.427 | neutral | None | None | None | None | N |
A/H | 0.5526 | ambiguous | 0.6037 | pathogenic | -0.885 | Destabilizing | 0.981 | D | 0.443 | neutral | None | None | None | None | N |
A/I | 0.3006 | likely_benign | 0.3676 | ambiguous | -0.123 | Destabilizing | 0.116 | N | 0.458 | neutral | None | None | None | None | N |
A/K | 0.433 | ambiguous | 0.4632 | ambiguous | -0.804 | Destabilizing | 0.241 | N | 0.438 | neutral | None | None | None | None | N |
A/L | 0.2571 | likely_benign | 0.3174 | benign | -0.123 | Destabilizing | 0.116 | N | 0.45 | neutral | None | None | None | None | N |
A/M | 0.2999 | likely_benign | 0.3654 | ambiguous | -0.337 | Destabilizing | 0.818 | D | 0.419 | neutral | None | None | None | None | N |
A/N | 0.3332 | likely_benign | 0.3856 | ambiguous | -0.677 | Destabilizing | 0.69 | D | 0.424 | neutral | None | None | None | None | N |
A/P | 0.8784 | likely_pathogenic | 0.9225 | pathogenic | -0.28 | Destabilizing | 0.773 | D | 0.387 | neutral | None | None | None | None | N |
A/Q | 0.3193 | likely_benign | 0.3574 | ambiguous | -0.727 | Destabilizing | 0.69 | D | 0.403 | neutral | None | None | None | None | N |
A/R | 0.3585 | ambiguous | 0.3574 | ambiguous | -0.57 | Destabilizing | 0.002 | N | 0.321 | neutral | None | None | None | None | N |
A/S | 0.1016 | likely_benign | 0.1078 | benign | -1.055 | Destabilizing | 0.09 | N | 0.469 | neutral | None | None | None | None | N |
A/T | 0.0891 | likely_benign | 0.1022 | benign | -0.913 | Destabilizing | 0.001 | N | 0.163 | neutral | None | None | None | None | N |
A/V | 0.145 | likely_benign | 0.1786 | benign | -0.28 | Destabilizing | 0.001 | N | 0.149 | neutral | None | None | None | None | N |
A/W | 0.8955 | likely_pathogenic | 0.9153 | pathogenic | -1.09 | Destabilizing | 0.981 | D | 0.5 | neutral | None | None | None | None | N |
A/Y | 0.6556 | likely_pathogenic | 0.7039 | pathogenic | -0.64 | Destabilizing | 0.818 | D | 0.465 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.